Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0886 ATGAGCTCTTTAATCCATCCCCACCACCACAACAGCCACCCTCCTCCGCTGCAGCCGCAACCATTCTCCGATTCCGACACTGACTCCGACAACGCCGGCAGCTCCTCCTCCGATCTCCTCCGCCACTCCGACCTCTCCTCCTCCATCTTCAAAACCTACTTCGAGTTCACCGTCCGCCACGTTTCCTCCACCTCCACCGCCACCACCGCTACCCCCTCCGATCTCTCAAAGATCCAGTCCTTTCTCACATCCTCCTCCTCCGGCGCACTCTCATGCCTCATTTGCCTTGAACGCATCAAACCCTCCGACCCAACATGGTCTTGCTCCTCCCTCTGCTTCGCTGTGTTCCACCTCCATTGCATTCAATCCTGGTCCCGCCAATCCTCCAATCTCGCCGCCTCACGCGCCGCCACGCGCCTCCCTATCACCCAACAGAAGGCCTCCGAAACCGCCCTCTGGAACTGCCCCAAATGTAGGGTAGAGTACCCCACGACCCACATCCCAAAATCCTACCTTTGCTTCTGTGGTAAGCTCGAGGACCCTCCGAATGATCCATGGGTTCTTCCTCATTCATGTGGTGAAATCTGTGGAAGGCCGTTGAAGCACAATTGTGGGCACCATTGTCTTCTCTTATGCCATCCTGGACCCTGCCCGTCCTGCCCGAAACTCGTCAAAGTTCGATGCTTTTGTGGCTCTGTTGAAGATGTTAGAAGGTGCGGGTTCAAGGAATTCTCTTGTGGGAAAACTTGTGGCAAGTTTTTGGATTGTGGGGTTCATAGATGTATTGAGACTTGCCATGAGGGGCAGTGTCCTCCGTGCAGGGCACGTGCCGTGTACCGGTGCCGGTGTGGGAAGAAGGAGGAGGAGAGGGAGTGCTGTGAGCGTGTATTTGGGTGTGGGGAGCCGTGTGAGAAGAGGCTTGGGTGTGGGAGGCATGTGTGTGAGAGAGGGTGCCATTCTGGGGAGTGTGGGGAGTGCCCTATGCAAGGGAAGAGGACCTGCCCTTGTGGGAAAAGGGTCTATGAAGGGATGCCTTGTGATGCTGTTGTGCCCTTGTGCGGGGCTACCTGTGATAAGATGCTCAGCTGCGGGTATCACCGGTGTCCCGAAAGGTGCCACCGAGGGCCGTGTGTTGAGAATTGCAGGACTGTTGTGAAGAAGTCCTGCCGATGCGGAAGCCTCAAGAAAGATGTTCCTTGCTATCAAGATTTGGCTTGTGAAAGGAAGTGCCAGAGGATGCGTGACTGCGGTAGGCATGCTTGTAAACGTCGCTGCTGCGATGGAGATTGCCCTCCATGCTCAGAGGTATGCGATAGGAAGCTTCGATGCAAGAACCATAAATGCCCTTCTCCATGCCATAGAGGTGCCTGTGCTCCTTGTCCAATAATGGTGACAATATCATGTGCATGTGGGGAGACACATTTTGAGGTTCCTTGTGGTACTGAAATGGATCAAAAGCCACCCAAGTGTCCTAAACGATGTCCTATTGCTCCTTTATGCCGCCATGCATCAAATTGCAAGCCACACAAATGCCATTATGGAGCCTGCCCTCCTTGTCGTCTACCTTGTGCAGAAGAGTACCCATGTGGCCATGCATGCAAATTAAGGTGTCATGGTGCCAAACCTCCTCCTAATCGAGAGTTTACTCTCAAACCAAAGAAAAAGAAAATGATACAACAAACTGAATGTACTCCTGGAACGCCGTGCCCTCCATGTCCAGAACTTGTGTGGAGACCATGTGTTGGACAACACATTGGAGCAGAGAGAATGATGGTCTGCTCCAATAAATCATTGTTCTCTTGCGAAAATTTGTGTGGAAATCCTCTACCATGCGGCAATCATTATTGTACCAAAACTTGCCATGCCTTGGAGAACTCCACGAACCAGCGACTGAGAAGTGAGCCGTGTGAGAAGTGTTCTCTTCCATGTGAAAAGGAAAGAGAACCTAAATGTCCACATCACTGCCCGCTGCGATGCCATCCTGGAGACTGCCCTCCATGCAAAGTGCTCATCAAGCGGTCATGTCACTGTGGCTCAATGGTCCATGCTTTTGAGTGCATATATTATAACAGCTTGTCTGCAAAGAATCAAGAGAAAGTTCGTTCATGTGGTGGGCCATGTCATAGAAAGTTGCCGAATTGTACACATCTATGTCCTGAGACATGTCATCCTGGTGAATGCCCAAATCCTGAGAAATGTAGTAAAAAGGTCACTGTTCGATGCAAATGCCAAACATTGAAAAAAGAATGGTTATGCCAAGATGTTCAAGCAGCGTATCATCGTGCTGGGTCCCATCCGAGGGATATACTCAAAAGTCAGTTTGGGATTGGACTCATTCCTTGCAATTCTGAATGTAAGAGTAAAGTGCAGGCTGTTGAGTCCGAGCTGCAATTGCGTAAATCTAGGGTTACAGAGGTAAAGGAGCCAGATAATGAAAAGTCAGCTCCAAAGCGACGAAAAAGGCGAGAACGAGTACAAGAATCCAAGGAAGCAACAAAACTACAGAAAATTATTACCAAAACGAAGCAGTTTCTTCTATTTGTCGTTGTTTTGGTCATACTTGTTGCTGCTACATATTATGGGTACAAGGGAATTTTACGGCTCAATGATTGGATGAATGAAGTTGAAGATCGAAGACAACAACGATATTCGCGAAAAAGATGA 2664 0.4996 MSSLIHPHHHNSHPPPLQPQPFSDSDTDSDNAGSSSSDLLRHSDLSSSIFKTYFEFTVRHVSSTSTATTATPSDLSKIQSFLTSSSSGALSCLICLERIKPSDPTWSCSSLCFAVFHLHCIQSWSRQSSNLAASRAATRLPITQQKASETALWNCPKCRVEYPTTHIPKSYLCFCGKLEDPPNDPWVLPHSCGEICGRPLKHNCGHHCLLLCHPGPCPSCPKLVKVRCFCGSVEDVRRCGFKEFSCGKTCGKFLDCGVHRCIETCHEGQCPPCRARAVYRCRCGKKEEERECCERVFGCGEPCEKRLGCGRHVCERGCHSGECGECPMQGKRTCPCGKRVYEGMPCDAVVPLCGATCDKMLSCGYHRCPERCHRGPCVENCRTVVKKSCRCGSLKKDVPCYQDLACERKCQRMRDCGRHACKRRCCDGDCPPCSEVCDRKLRCKNHKCPSPCHRGACAPCPIMVTISCACGETHFEVPCGTEMDQKPPKCPKRCPIAPLCRHASNCKPHKCHYGACPPCRLPCAEEYPCGHACKLRCHGAKPPPNREFTLKPKKKKMIQQTECTPGTPCPPCPELVWRPCVGQHIGAERMMVCSNKSLFSCENLCGNPLPCGNHYCTKTCHALENSTNQRLRSEPCEKCSLPCEKEREPKCPHHCPLRCHPGDCPPCKVLIKRSCHCGSMVHAFECIYYNSLSAKNQEKVRSCGGPCHRKLPNCTHLCPETCHPGECPNPEKCSKKVTVRCKCQTLKKEWLCQDVQAAYHRAGSHPRDILKSQFGIGLIPCNSECKSKVQAVESELQLRKSRVTEVKEPDNEKSAPKRRKRRERVQESKEATKLQKIITKTKQFLLFVVVLVILVAATYYGYKGILRLNDWMNEVEDRRQQRYSRKR* 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0886 887 MobiDBLite consensus disorder prediction 1 40 - -
Aev03g0886 887 CDD NF-X1-zinc-finger 353 402 - -
Aev03g0886 887 SUPERFAMILY RING/U-box 91 165 - -
Aev03g0886 887 MobiDBLite consensus disorder prediction 22 40 - -
Aev03g0886 887 Pfam NF-X1 type zinc finger 611 621 IPR000967 GO:0005634|GO:0008270
Aev03g0886 887 Pfam NF-X1 type zinc finger 204 221 IPR000967 GO:0005634|GO:0008270
Aev03g0886 887 Pfam NF-X1 type zinc finger 256 274 IPR000967 GO:0005634|GO:0008270
Aev03g0886 887 Pfam NF-X1 type zinc finger 363 381 IPR000967 GO:0005634|GO:0008270
Aev03g0886 887 Pfam NF-X1 type zinc finger 309 327 IPR000967 GO:0005634|GO:0008270
Aev03g0886 887 Pfam NF-X1 type zinc finger 653 668 IPR000967 GO:0005634|GO:0008270
Aev03g0886 887 Pfam NF-X1 type zinc finger 510 520 IPR000967 GO:0005634|GO:0008270
Aev03g0886 887 Pfam NF-X1 type zinc finger 443 461 IPR000967 GO:0005634|GO:0008270
Aev03g0886 887 Pfam NF-X1 type zinc finger 416 434 IPR000967 GO:0005634|GO:0008270
Aev03g0886 887 CDD NF-X1-zinc-finger 192 240 - -
Aev03g0886 887 SMART znfxneu3 363 383 IPR000967 GO:0005634|GO:0008270
Aev03g0886 887 SMART znfxneu3 529 574 IPR000967 GO:0005634|GO:0008270
Aev03g0886 887 SMART znfxneu3 506 521 IPR000967 GO:0005634|GO:0008270
Aev03g0886 887 SMART znfxneu3 443 462 IPR000967 GO:0005634|GO:0008270
Aev03g0886 887 SMART znfxneu3 611 641 IPR000967 GO:0005634|GO:0008270
Aev03g0886 887 SMART znfxneu3 714 735 IPR000967 GO:0005634|GO:0008270
Aev03g0886 887 SMART znfxneu3 204 222 IPR000967 GO:0005634|GO:0008270
Aev03g0886 887 SMART znfxneu3 416 435 IPR000967 GO:0005634|GO:0008270
Aev03g0886 887 SMART znfxneu3 309 328 IPR000967 GO:0005634|GO:0008270
Aev03g0886 887 SMART znfxneu3 651 669 IPR000967 GO:0005634|GO:0008270
Aev03g0886 887 SMART znfxneu3 256 275 IPR000967 GO:0005634|GO:0008270
Aev03g0886 887 ProSiteProfiles Zinc finger RING-type profile. 92 159 IPR001841 -
Aev03g0886 887 PANTHER NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1 17 883 IPR034078 GO:0003700
Aev03g0886 887 CDD NF-X1-zinc-finger 299 346 - -
Aev03g0886 887 CDD NF-X1-zinc-finger 406 454 - -
Aev03g0886 887 CDD NF-X1-zinc-finger 433 481 - -
Aev03g0886 887 MobiDBLite consensus disorder prediction 801 827 - -
Aev03g0886 887 CDD NF-X1-zinc-finger 246 284 - -
Aev03g0886 887 PANTHER NF-X1-TYPE ZINC FINGER PROTEIN NFXL1 17 883 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-X1 Aev03g0886 zf-NF-X1 0.0048 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0886 K15683 - gmx:100799540 1517.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0886 03 7213327 7218964 Aev03g0886 03 7213327 7218964 ECH