Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0859 ATGGAGGGAAAGGAACAAGACGTGTCCTTGGGAGCGAACAAGTTCTCGGAGAGGCAGCCAATAGGGACGGCGGCGCAGAGCCAGGACGACGCGGGGAAGGACTACACGGAGCCACCGCCAGCGCCGCTGTTCGAGCCGTCGGAGCTGGCGTCATGGTCGTTCTACAGAGCAGGGATAGCTGAGTTCGTAGCAACATTTCTGTTCCTGTACATAACCATATTGACCGTTATGGGGGTAAATCGGTCATCTTCCAAGTGTTCTACCGTTGGTATTCAAGGAATTGCTTGGGCCTTTGGTGGCATGATCTTTGCTCTTGTCTACTGCACTGCTGGCATCTCCGGGGGTCACATAAACCCAGCAGTGACTTTTGGGTTGTTGTTGGCTCGAAAATTGTCGTTGACAAGGGCGGTGTTCTACATGGTGATGCAGTGCTTGGGAGCCATATGTGGGGCTGGAGTGGTGAAGGGGTTCGAGGGGAAAACCTTCTACGGCGCCCACAACGGTGGTGCCAACTTCGTGAACCCTGGCTACACCAAAGGCGATGGGCTTGGCGCTGAGATTGTTGGCACCTTCGTTCTTGTTTACACCGTCTTCTCTGCCACCGATGCTAAGCGTAGCGCCAGAGACTCTCATGTCCCTATTTTGGCACCATTGCCAATTGGGTTCGCGGTGTTCTTGGTTCACTTGGCCACCATCCCTATCACTGGAACCGGTATCAACCCTGCTCGTAGTCTCGGTGCTGCCATCATCTTCAACAAGGACCTTGGTTGGAATGACCATTGGATTTTCTGGGTGGGACCATTCGTTGGAGCAGCTCTTGCTGCACTCTACCACGTTGTCGTGATCAGAGCCATTCCTTTCAAATCCCGGTGA 873 0.5395 MEGKEQDVSLGANKFSERQPIGTAAQSQDDAGKDYTEPPPAPLFEPSELASWSFYRAGIAEFVATFLFLYITILTVMGVNRSSSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGKTFYGAHNGGANFVNPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDLGWNDHWIFWVGPFVGAALAALYHVVVIRAIPFKSR* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0859 290 ProSitePatterns MIP family signature. 116 124 IPR022357 -
Aev03g0859 290 Gene3D Glycerol uptake facilitator protein. 41 288 IPR023271 -
Aev03g0859 290 TIGRFAM MIP: MIP family channel proteins 60 278 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev03g0859 290 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 290 IPR034294 -
Aev03g0859 290 SUPERFAMILY Aquaporin-like 48 282 IPR023271 -
Aev03g0859 290 MobiDBLite consensus disorder prediction 1 38 - -
Aev03g0859 290 Pfam Major intrinsic protein 48 278 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev03g0859 290 PANTHER AQUAPORIN PIP 1-3 1 290 - -
Aev03g0859 290 CDD MIP 56 281 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev03g0859 290 PRINTS Major intrinsic protein family signature 185 203 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev03g0859 290 PRINTS Major intrinsic protein family signature 221 243 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev03g0859 290 PRINTS Major intrinsic protein family signature 135 154 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev03g0859 290 PRINTS Major intrinsic protein family signature 261 281 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev03g0859 290 PRINTS Major intrinsic protein family signature 56 75 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev03g0859 290 PRINTS Major intrinsic protein family signature 98 122 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0859 Aev-Chr3 6913475 6915871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0859 1 290 Major Intrinsic Protein MIP AT4G23400 83.448 4.65e-169 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0859 K09872 - gmx:100791447 556.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0859 03 6913475 6915871 Aev03g0859 03 6913475 6915871 ECH
Aev03g0859 03 6913475 6915871 Aev07g0630 07 3939185 3940904 PCT