Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0850 ATGGCACAAAATAATACTTCAAATTCACTGGATTCACGTTGTTTATCACATGGGTTAGAAGCAGAGACCCAAGAATGGAGTTTTGCAGAGCACAAGAGTTTTGAAAGAGCACTAGCCACGGCCATGAATGACATGGAAAACCCACTGTATTGGACACACATGAAAGCCATGACTCCCATGACTACTGAGACTGAGTTGATGAAGCATTATATTGAATTGCGGGAAGACCTTGATCAAATTGAAGCAGGGGTTTATGATGATGAAATCTCAAAGCAATTCTATGCTCATGAATGTGCTTATTATCCATCTCCCACCATTTCTCATCAAATCATTAATAATGGCAACACCGTTGATGATGGGATTAGACAGAAGAAGAAAGTTGCTCATTGGACTCAAGATGAACATAAGAATTTTTTGAAGGGACTCAAAGAGCATGGTAGGAATTGGATAATCATAGCTGAAAACTACGTAAAGACAAGGAACCACATCCAAGTGGCAAGCCATGCTCAAAAGTACTTTAAGAAACAAGAACAAAATGCTTCAAATTCAGGGGAAGGGAACAAGAGCAATAGAAAAAAGCGCAATAGTATCCATGATATTACCATGGAAACAATTATGTGA 621 0.3865 MAQNNTSNSLDSRCLSHGLEAETQEWSFAEHKSFERALATAMNDMENPLYWTHMKAMTPMTTETELMKHYIELREDLDQIEAGVYDDEISKQFYAHECAYYPSPTISHQIINNGNTVDDGIRQKKKVAHWTQDEHKNFLKGLKEHGRNWIIIAENYVKTRNHIQVASHAQKYFKKQEQNASNSGEGNKSNRKKRNSIHDITMETIM* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0850 206 Gene3D - 20 86 - -
Aev03g0850 206 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 22 204 IPR043363 -
Aev03g0850 206 SUPERFAMILY Homeodomain-like 123 177 IPR009057 -
Aev03g0850 206 SMART sant 126 175 IPR001005 -
Aev03g0850 206 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 125 176 IPR006447 GO:0003677
Aev03g0850 206 Pfam Myb-like DNA-binding domain 130 173 IPR001005 -
Aev03g0850 206 CDD SANT 130 173 IPR001005 -
Aev03g0850 206 ProSiteProfiles SANT domain profile. 130 177 IPR017884 -
Aev03g0850 206 Gene3D - 129 178 - -
Aev03g0850 206 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 122 177 IPR017930 -
Aev03g0850 206 ProSiteProfiles Myb-like domain profile. 122 173 IPR001005 -
Aev03g0850 206 MobiDBLite consensus disorder prediction 175 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0850 Aev-Chr3 6827923 6828685 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev03g0850 Myb_DNA-binding 4.3e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0850 - - oeu:111365662 109.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0850 03 6827923 6828685 Aev07g0644 07 4044904 4046562 PCT