Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev03g0784 | ATGGAGGAAAATCAGTACTTGATGTGGATGAAGAGGAAACAAGTGTTGAAGTCACACATTGAAGCACCATATTTTGAGGCCAATTATTGTAATAATTCATCATCTTCTTGTTCTTCATGGGAGGAAAGGGCTTTTGCAGAAGATGCTGCAAGGATTCTTGGTGGATGCATATGGCCTCCAAGGTCATACTCATGCAATTTCTGCAAGAGGGAGTTCAGGTCTGCTCAAGCACTTGGTGGCCACATGAATGTTCATAGGAGAGACAGAGCTAGGCTCAAACAAACCCTCATTACATCTCATCCTCATCATAATGATGAATCTTCATCATCCCTTAATCATCATCATCATCACAAGAATAATAATGATTTTATCACAACAAGAAAACCATCAAATCAAGAAGATCAAAAGATTATGTCTCATATCTGGGGACAAAAGATGATAGAGTCTCCTGATGATTCAGAACAAAAAGAAGGGCTAGTAGTCAATGAAGAATCATCAAGGCCAAATGATGATTCTGTTGTTGAAACAAGTTTGTCTGTGGGACTCAACTTGCCAAATGATATTACAAGCTATAATAAAAGGCCAAAGACAGATTCTTCTAATTCCCTTATTCGTTCTGTTTTCATCAAGCCATGTTCGAATTTCCATCATCAGTCTGCAGATTTTGTACTTGGAATGGAAGATTTGGATCTTGAACTTAGGTTGGGGAAACCACAGAAAGCTTAG | 726 | 0.3843 | MEENQYLMWMKRKQVLKSHIEAPYFEANYCNNSSSSCSSWEERAFAEDAARILGGCIWPPRSYSCNFCKREFRSAQALGGHMNVHRRDRARLKQTLITSHPHHNDESSSSLNHHHHHKNNNDFITTRKPSNQEDQKIMSHIWGQKMIESPDDSEQKEGLVVNEESSRPNDDSVVETSLSVGLNLPNDITSYNKRPKTDSSNSLIRSVFIKPCSNFHHQSADFVLGMEDLDLELRLGKPQKA* | 242 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev03g0784 | 241 | SUPERFAMILY | beta-beta-alpha zinc fingers | 60 | 90 | IPR036236 | - | |
Aev03g0784 | 241 | MobiDBLite | consensus disorder prediction | 100 | 133 | - | - | |
Aev03g0784 | 241 | MobiDBLite | consensus disorder prediction | 148 | 170 | - | - | |
Aev03g0784 | 241 | Pfam | C2H2-type zinc finger | 63 | 87 | - | - | |
Aev03g0784 | 241 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 63 | 90 | IPR013087 | - | |
Aev03g0784 | 241 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 1 | 240 | - | - | |
Aev03g0784 | 241 | MobiDBLite | consensus disorder prediction | 148 | 173 | - | - | |
Aev03g0784 | 241 | PANTHER | OS07G0101800 PROTEIN | 1 | 240 | - | - | |
Aev03g0784 | 241 | MobiDBLite | consensus disorder prediction | 100 | 123 | - | - | |
Aev03g0784 | 241 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 65 | 85 | IPR013087 | - | |
Aev03g0784 | 241 | SMART | c2h2final6 | 63 | 85 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev03g0784 | Aev-Chr3 | 6134354 | 6135282 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aev03g0784 | 1 | 236 | C2H2 Transcription Factor Family | AT5G06070 | 36.398 | 4.82e-29 | 107 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Aev03g0784 | zf-C2H2_6 | 1.9e-06 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev03g0784 | - | - | aprc:113851273 | 232.646 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aev03g0784 | 03 | 6134354 | 6135282 | Aev07g2354 | 07 | 24326666 | 24327672 | PCT |