Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0784 ATGGAGGAAAATCAGTACTTGATGTGGATGAAGAGGAAACAAGTGTTGAAGTCACACATTGAAGCACCATATTTTGAGGCCAATTATTGTAATAATTCATCATCTTCTTGTTCTTCATGGGAGGAAAGGGCTTTTGCAGAAGATGCTGCAAGGATTCTTGGTGGATGCATATGGCCTCCAAGGTCATACTCATGCAATTTCTGCAAGAGGGAGTTCAGGTCTGCTCAAGCACTTGGTGGCCACATGAATGTTCATAGGAGAGACAGAGCTAGGCTCAAACAAACCCTCATTACATCTCATCCTCATCATAATGATGAATCTTCATCATCCCTTAATCATCATCATCATCACAAGAATAATAATGATTTTATCACAACAAGAAAACCATCAAATCAAGAAGATCAAAAGATTATGTCTCATATCTGGGGACAAAAGATGATAGAGTCTCCTGATGATTCAGAACAAAAAGAAGGGCTAGTAGTCAATGAAGAATCATCAAGGCCAAATGATGATTCTGTTGTTGAAACAAGTTTGTCTGTGGGACTCAACTTGCCAAATGATATTACAAGCTATAATAAAAGGCCAAAGACAGATTCTTCTAATTCCCTTATTCGTTCTGTTTTCATCAAGCCATGTTCGAATTTCCATCATCAGTCTGCAGATTTTGTACTTGGAATGGAAGATTTGGATCTTGAACTTAGGTTGGGGAAACCACAGAAAGCTTAG 726 0.3843 MEENQYLMWMKRKQVLKSHIEAPYFEANYCNNSSSSCSSWEERAFAEDAARILGGCIWPPRSYSCNFCKREFRSAQALGGHMNVHRRDRARLKQTLITSHPHHNDESSSSLNHHHHHKNNNDFITTRKPSNQEDQKIMSHIWGQKMIESPDDSEQKEGLVVNEESSRPNDDSVVETSLSVGLNLPNDITSYNKRPKTDSSNSLIRSVFIKPCSNFHHQSADFVLGMEDLDLELRLGKPQKA* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0784 241 SUPERFAMILY beta-beta-alpha zinc fingers 60 90 IPR036236 -
Aev03g0784 241 MobiDBLite consensus disorder prediction 100 133 - -
Aev03g0784 241 MobiDBLite consensus disorder prediction 148 170 - -
Aev03g0784 241 Pfam C2H2-type zinc finger 63 87 - -
Aev03g0784 241 ProSiteProfiles Zinc finger C2H2 type domain profile. 63 90 IPR013087 -
Aev03g0784 241 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 240 - -
Aev03g0784 241 MobiDBLite consensus disorder prediction 148 173 - -
Aev03g0784 241 PANTHER OS07G0101800 PROTEIN 1 240 - -
Aev03g0784 241 MobiDBLite consensus disorder prediction 100 123 - -
Aev03g0784 241 ProSitePatterns Zinc finger C2H2 type domain signature. 65 85 IPR013087 -
Aev03g0784 241 SMART c2h2final6 63 85 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0784 Aev-Chr3 6134354 6135282 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0784 1 236 C2H2 Transcription Factor Family AT5G06070 36.398 4.82e-29 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev03g0784 zf-C2H2_6 1.9e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0784 - - aprc:113851273 232.646
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0784 03 6134354 6135282 Aev07g2354 07 24326666 24327672 PCT