Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0779 ATGAAAGGGTTTGGATTTTCATGTGGAGCATGCAAGTTCCTAAGAAGAAGGTGCACAAGGGATTGTGTATTTGCTCCTTACTTTTCTTATGATCAGGCAGCAACACATTTTGCAGCAGTGCATAAGATTTTTGGTGCTAGCAACTTTGCTAGGCTCTTGCTACACCTTCCATTGCAGAGCAGAAGTGATGCTGCCATTACTATTTCTTATGAAGCATTAGCTCGTATGCATGATCCGATTCACGGTTGTGTCGCTCATATCTATGTATTGCAAGAACAGGTCGCAAACTTGCAAAGGGAGATAGATGATCTTCTAGGAAATCTGATGCCAAATTCCTTCTTTGGTGCTGACAATTATTGTGGCAATGTCCAAGAACTGATGAACTCAAACAAAGGGATAGAATATCTTGTGCATCAAGATGCTACATGGAATATTCAATGTTATCAAAGTCCTGTGGTTAGTCTACTTTCTCATGAAGGAAGTGGCATAGGCTTGGACAAACAGAATGAAATGGAGCTTGCATATGCAAATGGATTTGAAGAGTATATATATGGTGAGCCAGAACCAAATCCATTGGAGAAGTTCCTGTCTGGAATTGACCAAGAGGTCTTCCTTAGTCATCCATGGTTCAAGCATAATGCTGACATAAAAAACTAG 657 0.4033 MKGFGFSCGACKFLRRRCTRDCVFAPYFSYDQAATHFAAVHKIFGASNFARLLLHLPLQSRSDAAITISYEALARMHDPIHGCVAHIYVLQEQVANLQREIDDLLGNLMPNSFFGADNYCGNVQELMNSNKGIEYLVHQDATWNIQCYQSPVVSLLSHEGSGIGLDKQNEMELAYANGFEEYIYGEPEPNPLEKFLSGIDQEVFLSHPWFKHNADIKN* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0779 218 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Aev03g0779 218 Coils Coil 87 107 - -
Aev03g0779 218 Pfam Lateral organ boundaries (LOB) domain 7 102 IPR004883 -
Aev03g0779 218 PANTHER LOB DOMAIN-CONTAINING PROTEIN 33 1 216 - -
Aev03g0779 218 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0779 Aev-Chr3 6091428 6092246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0779 1 128 AS2 family AT5G06080 60.000 2.24e-51 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aev03g0779 LOB 4e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0779 K13945 - gmx:100809636 249.98