Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0771 ATGTCTTCAGGGACATCCTCGTATTGGTGCTACAGGTGTAGTCGGTTTGTGAGGGTATGGAGACTGGACACGGTGGTCTGTCCCGACTGCGACAGCGGTTTCATCGAGGAGATCGAGCCACCGCCGCGTTCCGTCAACCTCGACGCCCGTCGCCGTCGTTTCCCTGCCGCCGCCATGTACATGATAGGCCAGCGCCCAGGCGGTACCCCTGAAAACACCTCCTCCCGCACCGCCGCCCTCCGCCGCACCCGCCGCAACGGCGGGGACCGTTCACCCTTCAACCCGGTCATCGTCCTCCGCGGTGGATCAACGGAGTCCCTCGACGGCGGCGAAACCCCCCGCGGGTTTGAGCTCTTCTACGATGACGGTGCGGGTTCTGGCCTCAGACCCCTGCCTCAGAGCATGTCGGAGTTTCTGCTCGGATCCGGTTTCGATAGGCTTCTGGAACAGCTTTCTCAGATCGAGATCAACGGTATTGGGAGGTTTGAGCACCCTCCAGCATCAAAAGCAGCCATTGATTCCTTACCCACAATTGAAATCGACGACACCCACTTGATCATGGAATCTCACTGTGCCGTTTGCAAGGAGCCTTTTGATTTGGGGACTTCGGTGAGGGAAATGCCCTGTAAGCACATATACCACCAGGATTGCATATTGCCATGGCTAGCACTTCACAATTCTTGCCCTGTTTGTCGCCATGAGTTGCCCTCTGATGCGCCTAATAGTAATAGCAGTAGCAACAACTCTGCTGCTCCTTCTTCAGGGAACACTCTTGCTATGAACAATGAAGATGAGAATAATGTTGGGTTGACTATCTGGAGGCTGCCAGGTGGAGGGTTTGCTGTTGGGAGATTCTCTGGTGGGAGAAGGGGCGCTGAGAGGGAGCTTCCTGTGGTTTACACTGAGATGGATGGGGGGTTCAACAATGGAGGTGAGCCTAGGAGGATCTCTTGGTCTTCTAGAGGGAGTAGAGGCAGGGAGAGTGGTGGGTTTCAGAGGTTTTTCAGGAATTTGTTTGGTTGCTTCAGAGGTGGAGGTGGTGGTGGTGGCAGAGATGATGGGCTTCATAGGTCTGATTCGAGTTCCGAATCGCGGTTCGGAAGGGCAGGGTCTTCATATAGCATGGATCCCTCTCCACGCTCTCGTAGGACTTGGTCTATGGATGTAAACAGTGGAATGAGGGCATGGTGA 1191 0.5516 MSSGTSSYWCYRCSRFVRVWRLDTVVCPDCDSGFIEEIEPPPRSVNLDARRRRFPAAAMYMIGQRPGGTPENTSSRTAALRRTRRNGGDRSPFNPVIVLRGGSTESLDGGETPRGFELFYDDGAGSGLRPLPQSMSEFLLGSGFDRLLEQLSQIEINGIGRFEHPPASKAAIDSLPTIEIDDTHLIMESHCAVCKEPFDLGTSVREMPCKHIYHQDCILPWLALHNSCPVCRHELPSDAPNSNSSSNNSAAPSSGNTLAMNNEDENNVGLTIWRLPGGGFAVGRFSGGRRGAERELPVVYTEMDGGFNNGGEPRRISWSSRGSRGRESGGFQRFFRNLFGCFRGGGGGGGRDDGLHRSDSSSESRFGRAGSSYSMDPSPRSRRTWSMDVNSGMRAW* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0771 396 MobiDBLite consensus disorder prediction 347 396 - -
Aev03g0771 396 CDD RING-H2_RNF126_like 191 232 - -
Aev03g0771 396 Pfam Protein of unknown function (DUF1117) 268 364 IPR010543 -
Aev03g0771 396 MobiDBLite consensus disorder prediction 237 262 - -
Aev03g0771 396 Pfam zinc-ribbon 7 38 IPR039525 GO:0061630
Aev03g0771 396 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 2 340 - -
Aev03g0771 396 Pfam Ring finger domain 190 232 IPR001841 -
Aev03g0771 396 MobiDBLite consensus disorder prediction 62 95 - -
Aev03g0771 396 MobiDBLite consensus disorder prediction 364 388 - -
Aev03g0771 396 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 158 238 IPR013083 -
Aev03g0771 396 SUPERFAMILY RING/U-box 171 239 - -
Aev03g0771 396 MobiDBLite consensus disorder prediction 67 81 - -
Aev03g0771 396 SMART ring_2 191 231 IPR001841 -
Aev03g0771 396 MobiDBLite consensus disorder prediction 236 262 - -
Aev03g0771 396 ProSiteProfiles Zinc finger RING-type profile. 191 232 IPR001841 -
Aev03g0771 396 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RING1-LIKE PROTEIN 2 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0771 Aev-Chr3 6030930 6032120 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0771 130 238 C3H Transcription Factor Family AT5G01980 42.202 2.73e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0771 - K11982 gmx:100807324 536.954