Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0747 ATGGACTCTCCTCATTCTCCATCTTCTCCTTCTTCCCCTTATTATTCTTCCTCCTCTGAGAGCCATAGCCCTGACGGAAGCTTCGACGCCGACGAGCCCCGGACGCCGCTCGCCGTTCGCCGGGCCCTGCAGCTCCTCAACTCCGGCGAGCCTGAGCTGCGGGTCCAGGCCGCCCGCGACATCCGGCGGCTCACCAAGACGTCGCAGCGGTGCCGCCGACAGCTGGCTGAGGCTGTCGGTCCACTCGTCTCCATGCTCCGAGTCGACTCGCCCGAGTCACACGAACCCGCTCTCCTCGCCTTGCTCAACCTCGCCGTCAAAGACGAAAAGAACAAAATCAATATCGTCGAGGCCGGCGCATTAGAACCGATAATTAGTTTCCTCAAGTCAGAAAATCTAGATCTGCAGGAGTCTGCAACTGCATCTCTGCTAACACTTTCTGCCTCATCAACCAACAAACCAATCATCAGCGCTCGCGGCGCGATTCCTCTTCTTGTGGACATCCTCAGAGATGGAACCACACAAGCCAAAGCTGATGCAGTTATGGCTCTGTCTAATTTATCAACACACCCCAATAACCTCAACATCATCCTCGAAACGAATCCAATCCCTTTCATTGTAGGCCTCCTCAAAACATGCAAGAAATCCTCAAAAACAGCTGAGAAATGCTGTGCCCTGATAGAATCCTTGGTGGAGTATGATGAGGGAAGAATCGCCTTGACATCTGAAGAAGGAGGGGTCCTAGCAGTGATAGAAGTTCTCGAAAACGGCACGGTCCAGAGCAGAGAGCATGCTGTTGGAGCACTCTTAACAATGTGCCAAAGTGACAGATGCAAATACAGAGAACCAATACTCAGAGAAGGTGTAATTCCAGGACTTCTTGAGCTAACAGTTCAGGGAACTTCGAAGTCTCAGTCGAAAGCGCGAATTCTGTTGCAGCAACTGAGAGATTCTCCTTACCCAAGATCTGAAATCCAACCTGACACACTTGAGAACATAGTTTGCAACATCATATCACAGATTGATGGAGATGATCAATCTGGTAAAGCTAAAAAGATGCTGGCTGAGATGGTTCAGGTTAGCATGGAGCAGAGTCTAAGGCATTTGCAGCAAAGGGCTCTTGTGTGCACACCAACTGATATTCCTCTACCTGGTTGTGCTTCTGAAGTTCCTTCTAAATCGTAG 1185 0.5055 MDSPHSPSSPSSPYYSSSSESHSPDGSFDADEPRTPLAVRRALQLLNSGEPELRVQAARDIRRLTKTSQRCRRQLAEAVGPLVSMLRVDSPESHEPALLALLNLAVKDEKNKINIVEAGALEPIISFLKSENLDLQESATASLLTLSASSTNKPIISARGAIPLLVDILRDGTTQAKADAVMALSNLSTHPNNLNIILETNPIPFIVGLLKTCKKSSKTAEKCCALIESLVEYDEGRIALTSEEGGVLAVIEVLENGTVQSREHAVGALLTMCQSDRCKYREPILREGVIPGLLELTVQGTSKSQSKARILLQQLRDSPYPRSEIQPDTLENIVCNIISQIDGDDQSGKAKKMLAEMVQVSMEQSLRHLQQRALVCTPTDIPLPGCASEVPSKS* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0747 394 MobiDBLite consensus disorder prediction 1 24 - -
Aev03g0747 394 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 160 202 IPR000225 GO:0005515
Aev03g0747 394 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 119 161 IPR000225 GO:0005515
Aev03g0747 394 SUPERFAMILY ARM repeat 41 347 IPR016024 -
Aev03g0747 394 Pfam Armadillo/beta-catenin-like repeat 109 146 IPR000225 GO:0005515
Aev03g0747 394 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 26 376 - -
Aev03g0747 394 PANTHER U BOX DOMAIN-CONTAINING 26 376 - -
Aev03g0747 394 Gene3D - 26 375 IPR011989 -
Aev03g0747 394 MobiDBLite consensus disorder prediction 1 33 - -
Aev03g0747 394 SMART arm_5 149 189 IPR000225 GO:0005515
Aev03g0747 394 SMART arm_5 108 148 IPR000225 GO:0005515
Aev03g0747 394 SMART arm_5 190 232 IPR000225 GO:0005515
Aev03g0747 394 SMART arm_5 68 106 IPR000225 GO:0005515
Aev03g0747 394 SMART arm_5 234 274 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0747 Aev-Chr3 5794163 5797155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0747 39 317 U-box Gene Family AT2G23140 32.740 2.47e-36 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0747 - - gmx:100809684 637.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0747 03 5794163 5797155 Aev03g0747 03 5794163 5797155 ECH
Aev03g0747 03 5794163 5797155 Aev07g2317 07 23996189 23999625 PCT