Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0725 ATGGGAAGGCAACCATGTTGTGACAAGGTTGGGTTGAAGAAAGGGCCATGGACTGCTGAGGAAGACAAGAAACTCATCAGCTTCATCCTCACTAATGGCCAATGTTGCTGGAGAGCTGTTCCTAAGCTAGCAGGTTTATTAAGGTGTGGAAAAAGTTGCAGACTTAGATGGACAAATTATCTAAGGCCAGACCTAAAGAGAGGCCTTTTATCAGAATATGAAGAAAAAATGGTCATTGATCTTCATGCTCAACTAGGCAACAGATGGTCCAAGATTGCTTCTCACCTTCCTGGTAGAACTGATAATGAGATTAAGAACCATTGGAACACACACATAAAGAAAAAGCTCAAGAAAATGGGAATTGATCCTATTACACACAAGCCACTTTCCTCCACAACAGAACAATCTCAGACTCAAACTCAAACAGAACCACCACAAGAACAAGACCACAAAATTGAACCTGAAACAATAAAAGACCAAGCCAATAAGGAGGCAGAGCAGAAGCCAGAGGCATCACTTGAATCATCATCAACCATCACTGAGGACCAAATCATGACACCACCACTTTTTGACTCAATTGACCAAATTATTATGAATAATGGTTTTTGCACAGATGAACTTCCAATAATAGAACCTCATCAGATTCTTCCTCCTCCTCCTCCATCTGACCCTTCAACTTCATCAACCACAACAACAACCACAACATCATCATCTTCTTCTTCTTCTGCTTCTTATTCATATTCTTCCAAGTTTCTTGAGGACTTGCTACTCTCAGATTTTGACTGGCCTCAGAATAATAATAATAATAGTAATAACAGTGTGGCATTATGGGATGATGAGTTTATTAGCAATTGGGATTTGCTTATTAATGATGATGGTGGTGACAGAAAGCAGCAAGGTTTTGATGCCACTCTCAATCAGTACCCAAGAATGATCATGGATTCAGAATCTTGGGCATATGGCTTGTTTTGA 972 0.3992 MGRQPCCDKVGLKKGPWTAEEDKKLISFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLSEYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLKKMGIDPITHKPLSSTTEQSQTQTQTEPPQEQDHKIEPETIKDQANKEAEQKPEASLESSSTITEDQIMTPPLFDSIDQIIMNNGFCTDELPIIEPHQILPPPPPSDPSTSSTTTTTTTSSSSSSSASYSYSSKFLEDLLLSDFDWPQNNNNNSNNSVALWDDEFISNWDLLINDDGGDRKQQGFDATLNQYPRMIMDSESWAYGLF* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0725 323 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Aev03g0725 323 CDD SANT 16 61 IPR001005 -
Aev03g0725 323 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Aev03g0725 323 Pfam Myb-like DNA-binding domain 71 111 IPR001005 -
Aev03g0725 323 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Aev03g0725 323 MobiDBLite consensus disorder prediction 226 244 - -
Aev03g0725 323 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Aev03g0725 323 PANTHER MYB TRANSCRIPTION FACTOR 1 289 - -
Aev03g0725 323 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Aev03g0725 323 CDD SANT 74 112 IPR001005 -
Aev03g0725 323 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Aev03g0725 323 SMART sant 66 114 IPR001005 -
Aev03g0725 323 SMART sant 13 63 IPR001005 -
Aev03g0725 323 Gene3D - 70 170 - -
Aev03g0725 323 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 289 - -
Aev03g0725 323 MobiDBLite consensus disorder prediction 211 244 - -
Aev03g0725 323 MobiDBLite consensus disorder prediction 123 184 - -
Aev03g0725 323 MobiDBLite consensus disorder prediction 126 145 - -
Aev03g0725 323 Gene3D - 11 67 - -
Aev03g0725 323 MobiDBLite consensus disorder prediction 146 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0725 Aev-Chr3 5562101 5564520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0725 1 323 MYB Transcription Factor Family AT5G16600 47.443 1.99e-103 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev03g0725 Myb_DNA-binding 1.2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0725 K09422 - gmx:100803624 421.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0725 03 5562101 5564520 Aev03g0725 03 5562101 5564520 ECH