Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0711 ATGGCAAGTTCCTTCAATGCACCAACAGCTGCTAGAGATCAGAAAAGAAAGAGCAGCCCATTGAGAGAAAGAGATGACGCTCGTCCTCATCCGCCAATGATGCCACCGGCAAAGAAGGCACGTTTTGTGTGGTCCACCGAGCACCGTGAACAATTTGTAAATGCTGTCACGCAACTCGGCAATGAGGCTGTGCCCAAGAAAATTCATGAATTGATGAACATTCCCGGATTGACAAGAGAACATGTTGCCAGTCATTTGCAGAAATATAGACTTAAGAGGGAGAAAATGGGTAAGGCGGCTACAGAGGAAATTAAGCATGGTCCTAATAACCAGTTGGGTTCATCATGTACAAGATTATTCAGCACGCAAGCTGCATATGGAGGTGCTTATACTTGTTCTACTATAGCCCCACAATATGATGATGATTCCAACAGCAATGCTCTTCATTTCCACCCGCTCTTGTTTAAAGAAGATGCAATATTTATATCACCATCATCACAGCAAGCCGCATATGCTGCTACTCATACCACACGAGCACAAATAGACTATGATCATTCCAACACCACCAACATTATTATTATTCCATAG 588 0.4337 MASSFNAPTAARDQKRKSSPLRERDDARPHPPMMPPAKKARFVWSTEHREQFVNAVTQLGNEAVPKKIHELMNIPGLTREHVASHLQKYRLKREKMGKAATEEIKHGPNNQLGSSCTRLFSTQAAYGGAYTCSTIAPQYDDDSNSNALHFHPLLFKEDAIFISPSSQQAAYAATHTTRAQIDYDHSNTTNIIIIP* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0711 195 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 39 92 IPR006447 GO:0003677
Aev03g0711 195 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 44 94 IPR017930 -
Aev03g0711 195 Pfam Myb-like DNA-binding domain 44 90 IPR001005 -
Aev03g0711 195 MobiDBLite consensus disorder prediction 1 37 - -
Aev03g0711 195 SUPERFAMILY Homeodomain-like 37 95 IPR009057 -
Aev03g0711 195 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 36 173 IPR044841 GO:0003700|GO:0006355
Aev03g0711 195 Gene3D - 36 97 - -
Aev03g0711 195 MobiDBLite consensus disorder prediction 15 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0711 Aev-Chr3 5392536 5393319 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0711 38 100 Response Regulator Gene Family AT3G16857 65.625 2.16e-20 86.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aev03g0711 Myb_DNA-binding 3.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0711 - K14491 csin:114270834 85.8853