Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0710 ATGGCAGATTTTGACTCTGACAGAGCTATTAAAGGTGATGGGCTTGTTAGTGATGATTCTTGTATTGTTAGAGAAAAAAGAAAGAGGAGGCAATCCATAGAAAGAGATGATGGTGTGGAAATAGCAGCAGCAGGACATGATGGCCATCCTCCAATGATGCCAGCAGCGAAGAAGAAGGCCCGTTTTGTGTGGACCCCTCAGCACCATCGACACTTCGTAGATGCTGTCACACAACTTGGCAATAAGGCTGTGCCGCGGAGAATTGTGGAATTGATGAACATGCCTGGATTGACAAGAGAACATGTTGCTAGTCATTTGCAGAAATACAGAGTTCAGAAGGAGAAAGAGAGTAAGGAGGCGACAGAGGAACACAATGGGAATGGGAATGGGAGAGTAGAAGCTAATAATGCTGATGGTAGCAGACATGTCTCACTCTCACCACAACCACAAGCAGAGAACTTCAATGACTCAGCAAGAAAAGCTACATTCAAGAAAAGGAAGAAGGGTCTGATGAAGAAGGTTGGTGAACTTAGCACCCTTTGTGGAATTGATGTATGTGCTATAGTTTATAGCCCTTATGATCCTCAGCCAGAGATTTGGCCACCATCACCATTGGGAGTTCAAAGGGTGATTGCGAAATTTCGGGGGATGCCGGAATTGGAGCAGAGCAAGAAGATGGTGAACCAAGAGAGCTTCCTTAGGCAGAGGATTCTTAAGGCCAAGGAACAATTGAAGAAGCAAGGGAAAGATAATAGAGAAAAAGAGATAACACAACTCATGTTTCAGTACCTTAGTGAAGGTAAAATCTTGCATAATTTAAGCATGGTTGATTTGAATGATTTAGCTTGGTTAATTGAGCAGAATTTGAAGGAAATTAATAGAAGGATTGAAGCATTGACCAAGAAGGGTCAGAGTAGTCAAGCCCAAACAGTGGTGACTAATGAGGTAATCAAGATTGAAGAGAAGGATAAGGAACAAGAGAGTCATGGCCAAGGGTTGGATATGAACATGGATTTCATGCAAAAGCAGAATTGGTTTGTGAATTTGATGGATGGTGCTGGAGAGAATGAGACACAGCAGGGTTTTGGAGATGTCAATCATCAAAGTGGCTTTTGGCATAATAATAATAACTCATTTTTCCATTGA 1146 0.4223 MADFDSDRAIKGDGLVSDDSCIVREKRKRRQSIERDDGVEIAAAGHDGHPPMMPAAKKKARFVWTPQHHRHFVDAVTQLGNKAVPRRIVELMNMPGLTREHVASHLQKYRVQKEKESKEATEEHNGNGNGRVEANNADGSRHVSLSPQPQAENFNDSARKATFKKRKKGLMKKVGELSTLCGIDVCAIVYSPYDPQPEIWPPSPLGVQRVIAKFRGMPELEQSKKMVNQESFLRQRILKAKEQLKKQGKDNREKEITQLMFQYLSEGKILHNLSMVDLNDLAWLIEQNLKEINRRIEALTKKGQSSQAQTVVTNEVIKIEEKDKEQESHGQGLDMNMDFMQKQNWFVNLMDGAGENETQQGFGDVNHQSGFWHNNNNSFFH* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0710 381 Pfam Myb-like DNA-binding domain 64 110 IPR001005 -
Aev03g0710 381 Coils Coil 282 309 - -
Aev03g0710 381 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL80 155 345 - -
Aev03g0710 381 PANTHER SERUM RESPONSE FACTOR HOMOLOG 155 345 - -
Aev03g0710 381 SUPERFAMILY Homeodomain-like 57 115 IPR009057 -
Aev03g0710 381 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 59 112 IPR006447 GO:0003677
Aev03g0710 381 MobiDBLite consensus disorder prediction 128 157 - -
Aev03g0710 381 SMART madsneu2 138 202 IPR002100 GO:0003677|GO:0046983
Aev03g0710 381 Gene3D - 55 116 - -
Aev03g0710 381 CDD MADS_SRF_like 155 228 IPR033897 GO:0000981|GO:0000987|GO:0045944
Aev03g0710 381 MobiDBLite consensus disorder prediction 110 126 - -
Aev03g0710 381 MobiDBLite consensus disorder prediction 110 158 - -
Aev03g0710 381 ProSiteProfiles MADS-box domain profile. 155 203 IPR002100 GO:0003677|GO:0046983
Aev03g0710 381 SUPERFAMILY SRF-like 155 238 IPR036879 GO:0003677|GO:0046983
Aev03g0710 381 Gene3D - 155 239 IPR036879 GO:0003677|GO:0046983
Aev03g0710 381 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 114 IPR017930 -
Aev03g0710 381 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 155 193 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0710 Aev-Chr3 5376837 5381444 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0710 155 306 Type I MADS-box Gene Family AT5G48670 62.821 1.02e-53 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aev03g0710 Myb_DNA-binding 3.6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0710 - - gmx:100813231 327.791