Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0694 ATGACAATGGGAGAAGAGCCCTTAGCAGCAGCTTCAGTCCCATTTGACAGAGCTGTTGAACAGGCAATTTTATCTATAAAGAAAGGTGCATGTTTACTCAAGTGTGGTCGTAGAGGAAAGTCAAAGCCCTGCCATTTCAGACTTTCACCGGATGAGAGGAATTTGATTTGGTACTCTAGGGAGCAGGAAAAGCAATTGAGATTGAGTGCAGTGACAAATATTATTCAAGGCCAGGGTAATATAAGATCCCAGAGGCAAAACGAACCCGAAGGGGAGTGCCATTCTTTTTCACTAATCTATGCTAATGGTGAACGCTCTCTTAATCTGATATGCAAGGACAAAGCACAGGCTGCTTCTTGGTTTGTTGGCTTGAGAGCTGTGATTTCTAGGTGCCACCAGCATCCTCGACTGTTTAGTAGTTTAAGAAGCTGCAAAGGGGTGCAGAGTTGTGTCAGTAGTCCCGCTGGGATATTACGGAGAAAGAAAAATCTTGGCCTTCTGGAAGATACTTATCAATTCAATCAGGTACATAGTGTATGTGCAAGTCCTACTTTGTCACTCTCAGAAAGGTGCTTTTCTGATGGCTTGGCATATACTTCAGATAAAATTTATTCATCAACATCTTTCCCATCCAGCACTCATAGCATGATTGATAGCTCAGTCCCAAGCTCTCCGTATATTGATCCGGCTGTTCCCAGTAAGATCGAATCAACACGCATTAAGAAGGAGGGCAGGAAGTTTTCGTGCAGTTCTCTGATGACTCCGTTTGTAGGAAATAACAATGTATTGAAGGATGTAATGGTATGGGGTGGAGGGATTGGAGGCCTTGTAGGGATTGTAAATGAAAGGTTTGTCAACCAACAAGGGATTTATTCTTTAGTGCCAAAGTTACTCGAATCCACGACGATGTTAGATGTAAAAAATATAGCTTTAGGAGGAAAACATGCTGCCTTAGTAACAAAACAAGGCGAAGTGTTCTGCTGGGGTGAAGGAAAGTGGGGAAGGCTGGGGCAAAAAATTGACATAGATATTAGCTCCCCAAAAATAGTCGATTCTCTTAATGGTGTCCATATAAAACAAGTTGCCTGTGGTGAATACCATACGTGTGCTTTGACAGATTCGGGTGAAGTTTATACATGGGGGAATGATGTCTGTTGTGCAGATTTGGTAAATGAAGGGAGAATTCAAAGTCAGTGGATACCGCATAAACTTTCCGGTCCACTAGATGGTATTAGTATCTCCAGTATTTCTTGTGGAGAATGGCACACCGCAATTGTCTCTAGTTGTGGGCGGTTATTTACATATGGAGATGGAACATTTGGAGTTCTTGGGCATGGGAATCTTCGGAGCTATTCCCGACCAAAAGAAGTCGAATCTCTTCGTGGTCTAAGGGTGAGGTCTGTTGCTTGTGGATCATGGCATACAGCTGCAATTGTTGAAGTCATGGCTGACCGTTTTCGGTATAATACTCCTACTGGTAAGCTGTTTACATGGGGTGATGGAGACGAAGGGAGACTTGGTCATGCTGATAATGGGAACAAGCTTGTACCGGCATGTGTTTCGCAACTTGTAGATTACGACTTTGTTCAAGTAACTTGTGGAAGAATGTTGACTGCGGCACTTACTAATATGGGCAGAGTTTTTACGATGGGAAGTGCGAAACATGGACAGTTGGGAAATCCACATGCCAGGGATAAAGCAGTTATGGTTGAGGGACTGCTTAAACAAGAGTTTATTAAAGTGATATCTTCCGGTTCATATCATGTCGCTGTTTTGACTTCTTCCGGGAGTGTCTATACATGGGGAAAGGGCGAAAACGGACAGCTCGGGCTAGGTGATACAGACGACAGATGCATGCCTTCATTTGTTCAGGCTCTAAGAGACAGGCAGGTTGATACTATTACTTGCGGACCAAGCTTCACGGCTGCAATCTGTTTACATAAACCCGTTTCTATCAGCGACCAGTCTGTGTGTAGTGGTTGTAGGTTGCCATTCGGGTTCACAAGGAAGAAGCATAACTGTTATGACTGTGGTCTTCTCTTTTGCCGCGCTTGTAGTAGTAAAAAGGTTGTAAATGCATCTCTAGCCCCAAGTAAGAGCAAGGCCTTCCGGGTTTGTGATCAGTGCTTTGATAAACGGCAAGGGAGTACACATTCAGCAATGGCATCGAGATTGAGAAGTTGCAGCACTCAACAGCTACACAAACTTCCCGATCTGACTGAAGATAGAGGAGAAACAACTATGACACAAGGACCCTTATTGACTCTCGGTCAATCATGTTATAGGAAAAGCATGCCGAGCGGACGGAAGGACTTTAAAAACCAACAAGAGAACCAGCAGCATTTAGAAGATAGTTCTTCTATGTTCAGTGGAATACCACAATGGGGCCAAGTTCCATGCCCTGCCTTATTTAAAATCAATTGTAAGGAAAATTCAGCTGTGCATGTTTCTTCATCAAAAAATAGAGTAGCTACTGTTTCACAATGGAGCATAGAATCCACAACGTCCAACTTCTCGAATACTGAAACAGATACAACAAAATCTGATAAGACGCTCATGGAAGAAGTTCAGAGGCTGAGAGCTGAGGTTAAGAGACTTGAAGAACAGTGTGAGATCAAAAACCACAAAATACAAGAGTGTCAACAAAAAATCGAGGAGAGCTGGTTTGTGGCAAAGGAGGAAGCAGCTGAGTACAAGGCAGCAAAAGAGTTCATAAATGCTTTGGCTTTAAGGCTTCACACAATATCAGGAAAAGATAATGCTGGACAAGAAGTAAAGGTTGCTGAATTTCTGCCTAATCTGGCTCCCATACACACAGACATGAACACCCCAAGAGATTGCAACATGGACAGTCTAGCTAACTCCCCTATAGTTTTCTCAGACACTTTGAAATCAAAATTTGGGAGAAACTTGTTCCCCAAGAATAATAACAACTATGATAATAAGTTAATGGAGAATTCTTGCATCACCAAACCAGAATCTCAACAAGACGGTGCCGCTGCCGGTGGCGACGGCTTGAAGGTAGAATGGGTAGAACAGTATGAGCCTGGTGTTTACATCACATTCACAACCTTGCCTTGTGGGAAAAGGGGCCTTAAGCGAGTCAGATTTAGCCGGAAACGATTCTCGGAGAAGGAAGCCGAACGATGGTGGGAAGAGAATCAAGCCACAGTCTACCATAAGTTCCACCCCACAGATGAAGAACTTGTTGCTTATTACCTCAAAAGGAAGATCAATGGTCGTAAGATTGAGTTGGAGATCATTCCTGAAGTTGATCTCTACAAGTGTGAACCATGGGACTTGCCAGGGAAGTCATTGTTGCCGGGGAAAGACTTGGAGTGGTACTTCTTCAGCCCAAGAGATAGGAAGTACCCGAATGGATCAAGGACGAACAGAGCAACAAAATCAGGATATTGGAAGGCCACCGGGAAAGACAGGAAGGTGAATTCTCAGAGCCGGGCAGTGGGAATGAAGAAAACCCTAGTTTACTACAGAGGGAGGGCCCCACATGGCTCTCGCACTGGTTGGGTTATGCATGAGTATCGCCTTGATGAGTCCCAATGTGAATCTCCTGCTTCTGGCTTTCAGGATGCATATGCTCTTTGCCGTGTGTTCAAGAAGACGGCGGTGATAGTCCCAAAAGTGGAACAACAGTACTGTGCTGGTAACATGACAAGAAGTGATCAATCCTCAAGCATTGAGCTCTACTCTGAAGCAAGAGGCGAAGTTTTTGAGAGCTCAAATTATAGTAACAATAATTTGATGCCATCATCATGGGATAATAATAATAATAATAATGCGTGCTCATCATCAACCCATCATCAAAATAATAATATCAATGGCGGGACAATAATAAGGGATAATAATAATGGCAACTGGTCGTCACAAGATCTTACATTTCTTAATTGCCTTCCAACATCATCATCATTTCCCCATTATGGAGCCATACCTAATTACCCTCCATCCAAGGTGGATATAGCACTAGAGTGTGCAAGGATGCAGCATAGGTTTTCCATGCCTCCATTGGAAGTGGAATTCCCTCAAGTTGGAATTAATAGTAATTCTGAGTTGAAGATGATGACTCATCCCTCTAGTTCTTCAATAATGTATGGAGGAAGCAGTGTTAGGAATAATAATGAAACAGATATCTTGCAGGAAATTCTTTCAGTTGCTCATGCTTCCAAGGAATTGATAAACCAATCCAACTATTCTCCTTCACAGTCATTATTATTAGGTGAAGGCAATAATAATAATGATGAAGATTATGCTTCTCATGGCAATGATTTTACTTTTATGGTTGGTGGTAGTTACAATAATCATCATCAAGCAAATAATGATGTGAACTCCATGAGATATGTTGACAAAATATGGCAAGATCATAACATTATAAGGTCAATTGAGATTGGAGATCTTGATAGTGAATTCAAGGCTGATGAAAGGATGGTTGAGAATTTTGGAGGATGGATGGGAATGTCAACCGAAGATCTAGAAAAGAGCTTTATGGAAGAGCAAAAGCTTGTGCCAATTGAGGATATTTCAAGCCTCCAAACAAACATAGAAGAGAATGAGGTTCAAGCATGTGAGCAACACAATAGCAACACCAATGAATTCAATGACACAGACATTGATGAGTTCTCATTGGGTTTCATCAATGATAGTGATCCAAATAACAACAATGAGAATTTCATAGTAGATGACAACAACAACAATAACAACATTGATTATTCAAATTCTCCAAGCTTTGAGGTTGTTGAGGAAACCAAAGTTAGTCATGGAATGTTTGTCTCAACTCGCCAAGTAGCTGACACATTCTTCCACCAAATTGTTCCTTCACAAACCATCAAAGTTCAACTCAATCCAGTTATGGCTAATAACACTACTAGCCATTCTTCAGAGACACCAATGACAATAATGAAGTGGCAACAAGGGTTTCATAATTTCTTTACTAAATTGAACACAACAGCTAGTGCTATTTTATTCTTCTTTGCTCTATTGGTGATGCTTTGTGTTCAATTTAAGATACAAGTGATGAGAAATTGGAAACCTAAAAGCATGAAGAGAATGAGACAATTAGATGAGAAGAAATTGATATGGAATGAGCAAGAAAAAAATTGTTGTGTTGGCATCAAAAGTGGGAAGAAAGGATTTGGTGTGGTGATGAAGAAAATTGGCATTTTCCTCTCCATATCTTTGGCTCTTTGTACCATGTGGGCTAATCATATCATAGTTAGTCCTTGA 5238 0.4162 MTMGEEPLAAASVPFDRAVEQAILSIKKGACLLKCGRRGKSKPCHFRLSPDERNLIWYSREQEKQLRLSAVTNIIQGQGNIRSQRQNEPEGECHSFSLIYANGERSLNLICKDKAQAASWFVGLRAVISRCHQHPRLFSSLRSCKGVQSCVSSPAGILRRKKNLGLLEDTYQFNQVHSVCASPTLSLSERCFSDGLAYTSDKIYSSTSFPSSTHSMIDSSVPSSPYIDPAVPSKIESTRIKKEGRKFSCSSLMTPFVGNNNVLKDVMVWGGGIGGLVGIVNERFVNQQGIYSLVPKLLESTTMLDVKNIALGGKHAALVTKQGEVFCWGEGKWGRLGQKIDIDISSPKIVDSLNGVHIKQVACGEYHTCALTDSGEVYTWGNDVCCADLVNEGRIQSQWIPHKLSGPLDGISISSISCGEWHTAIVSSCGRLFTYGDGTFGVLGHGNLRSYSRPKEVESLRGLRVRSVACGSWHTAAIVEVMADRFRYNTPTGKLFTWGDGDEGRLGHADNGNKLVPACVSQLVDYDFVQVTCGRMLTAALTNMGRVFTMGSAKHGQLGNPHARDKAVMVEGLLKQEFIKVISSGSYHVAVLTSSGSVYTWGKGENGQLGLGDTDDRCMPSFVQALRDRQVDTITCGPSFTAAICLHKPVSISDQSVCSGCRLPFGFTRKKHNCYDCGLLFCRACSSKKVVNASLAPSKSKAFRVCDQCFDKRQGSTHSAMASRLRSCSTQQLHKLPDLTEDRGETTMTQGPLLTLGQSCYRKSMPSGRKDFKNQQENQQHLEDSSSMFSGIPQWGQVPCPALFKINCKENSAVHVSSSKNRVATVSQWSIESTTSNFSNTETDTTKSDKTLMEEVQRLRAEVKRLEEQCEIKNHKIQECQQKIEESWFVAKEEAAEYKAAKEFINALALRLHTISGKDNAGQEVKVAEFLPNLAPIHTDMNTPRDCNMDSLANSPIVFSDTLKSKFGRNLFPKNNNNYDNKLMENSCITKPESQQDGAAAGGDGLKVEWVEQYEPGVYITFTTLPCGKRGLKRVRFSRKRFSEKEAERWWEENQATVYHKFHPTDEELVAYYLKRKINGRKIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSQSRAVGMKKTLVYYRGRAPHGSRTGWVMHEYRLDESQCESPASGFQDAYALCRVFKKTAVIVPKVEQQYCAGNMTRSDQSSSIELYSEARGEVFESSNYSNNNLMPSSWDNNNNNNACSSSTHHQNNNINGGTIIRDNNNGNWSSQDLTFLNCLPTSSSFPHYGAIPNYPPSKVDIALECARMQHRFSMPPLEVEFPQVGINSNSELKMMTHPSSSSIMYGGSSVRNNNETDILQEILSVAHASKELINQSNYSPSQSLLLGEGNNNNDEDYASHGNDFTFMVGGSYNNHHQANNDVNSMRYVDKIWQDHNIIRSIEIGDLDSEFKADERMVENFGGWMGMSTEDLEKSFMEEQKLVPIEDISSLQTNIEENEVQACEQHNSNTNEFNDTDIDEFSLGFINDSDPNNNNENFIVDDNNNNNNIDYSNSPSFEVVEETKVSHGMFVSTRQVADTFFHQIVPSQTIKVQLNPVMANNTTSHSSETPMTIMKWQQGFHNFFTKLNTTASAILFFFALLVMLCVQFKIQVMRNWKPKSMKRMRQLDEKKLIWNEQEKNCCVGIKSGKKGFGVVMKKIGIFLSISLALCTMWANHIIVSP* 1746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0694 1745 SUPERFAMILY FYVE/PHD zinc finger 652 725 IPR011011 -
Aev03g0694 1745 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 323 374 IPR000408 -
Aev03g0694 1745 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 545 595 IPR000408 -
Aev03g0694 1745 SUPERFAMILY PH domain-like 18 128 - -
Aev03g0694 1745 Coils Coil 849 883 - -
Aev03g0694 1745 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 430 481 IPR000408 -
Aev03g0694 1745 SUPERFAMILY NAC domain 1060 1207 IPR036093 GO:0003677|GO:0006355
Aev03g0694 1745 Gene3D - 489 658 IPR009091 -
Aev03g0694 1745 Gene3D - 388 484 IPR009091 -
Aev03g0694 1745 Pfam No apical meristem (NAM) protein 1061 1183 IPR003441 GO:0003677|GO:0006355
Aev03g0694 1745 PRINTS Chromosome condensation regulator RCC1 signature 416 432 IPR000408 -
Aev03g0694 1745 PRINTS Chromosome condensation regulator RCC1 signature 591 612 IPR000408 -
Aev03g0694 1745 PRINTS Chromosome condensation regulator RCC1 signature 325 341 IPR000408 -
Aev03g0694 1745 PRINTS Chromosome condensation regulator RCC1 signature 432 446 IPR000408 -
Aev03g0694 1745 PRINTS Chromosome condensation regulator RCC1 signature 265 281 IPR000408 -
Aev03g0694 1745 PRINTS Chromosome condensation regulator RCC1 signature 534 552 IPR000408 -
Aev03g0694 1745 PRINTS Chromosome condensation regulator RCC1 signature 375 391 IPR000408 -
Aev03g0694 1745 Pfam Transcription factor regulating root and shoot growth via Pin3 1008 1062 IPR013591 -
Aev03g0694 1745 PANTHER F12P19.9 PROTEIN 19 1065 - -
Aev03g0694 1745 CDD FYVE_like_SF 658 710 - -
Aev03g0694 1745 SUPERFAMILY RCC1/BLIP-II 264 648 IPR009091 -
Aev03g0694 1745 CDD PH_PLC_plant-like 17 129 - -
Aev03g0694 1745 Gene3D - 218 387 IPR009091 -
Aev03g0694 1745 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 659 713 IPR013083 -
Aev03g0694 1745 Gene3D NAC domain 1065 1211 IPR036093 GO:0003677|GO:0006355
Aev03g0694 1745 ProSiteProfiles BRX domain profile. 1008 1063 IPR013591 -
Aev03g0694 1745 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 375 429 IPR000408 -
Aev03g0694 1745 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 596 647 IPR000408 -
Aev03g0694 1745 Gene3D - 18 135 IPR011993 -
Aev03g0694 1745 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 264 322 IPR000408 -
Aev03g0694 1745 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 652 714 IPR017455 -
Aev03g0694 1745 Pfam FYVE zinc finger 654 712 IPR000306 GO:0046872
Aev03g0694 1745 Pfam Regulator of chromosome condensation (RCC1) repeat 430 478 IPR000408 -
Aev03g0694 1745 Pfam Regulator of chromosome condensation (RCC1) repeat 493 541 IPR000408 -
Aev03g0694 1745 Pfam Regulator of chromosome condensation (RCC1) repeat 374 425 IPR000408 -
Aev03g0694 1745 Pfam Regulator of chromosome condensation (RCC1) repeat 595 644 IPR000408 -
Aev03g0694 1745 Pfam Regulator of chromosome condensation (RCC1) repeat 323 371 IPR000408 -
Aev03g0694 1745 Pfam Pleckstrin homology domain 20 126 IPR001849 -
Aev03g0694 1745 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 493 544 IPR000408 -
Aev03g0694 1745 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 19 1065 - -
Aev03g0694 1745 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 468 478 IPR000408 -
Aev03g0694 1745 ProSiteProfiles NAC domain profile. 1056 1207 IPR003441 GO:0003677|GO:0006355
Aev03g0694 1745 SMART fyve_4 646 715 IPR000306 GO:0046872
Aev03g0694 1745 SMART PH_update 25 131 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0694 Aev-Chr3 5197499 5216454 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0694 1061 1671 NAC Transcription Factor Family AT1G65910 45.325 1.91e-129 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev03g0694 NAM 4.8e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0694 - - adu:107481014 1771.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0694 03 5197499 5216454 Aev03g0694 03 5197499 5216454 ECH