Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0691 ATGTCACTAACTCTGTTCTTCTTCATCTTCATCATCACATTCACTCTCTTCACCTTCAATTCACAATCCACCTCTCTCTTCTCTTCTCCTTCACCTCCAGCAGCACCCTTTGATTCTTCTTCTGAATCTTCTGAATCTTCTTCTTCTTCTTATGTCGAATGGCTCTCTGCTCACGCCACTTCCTACACCGCCGCTGATTCCGCCAATGCTTTGGGCGGCGCGTGCGGCTACTCCGACGGTTACGGCGCCGCTGCAGCGACGGGACTCAGCGAGGCCTTATTCGAGCGTGGACAGATCTGCGGCGCGTGCTTCGAGCTCCGGTGCGCGGACGAGGAGGCGCCGTTCGACCGCCGGTGGTGCATCCGTGGAAGCTCCGTGATCGTGACGGCGACGGACTTCTGCGCACCGAACTACGGGTTCGATGCGGACGGTGAGAGCGGCGGAGGACGGTGTAACCCTCCGAAGCAGCATTTCGTGATTCCGATTGCAGCGTTCGAGAAGATCGCGATCTGGAAGGAAGGGAACTTGCCAGTACAGTATCGCAGGATAAAATGCAGAAGAGAAGGAGGAATGAGATTCACAATAACAGGCTCTGGTATCTTCATTTCGGTGCTTATAAGCAATGTGGCTGGAACTGGTGAGATTGTTGCTGTGAAGATTAAGGGTTCAAGAACTGGTTGGCTTCCAATGGGTCGTAATTGGGGCCAAAACTGGCATGTCAATGCATTACTACAGAACCAACCTCTTTCTTTTGAGGTTACTGACACTGATGGTAAAACTGTTACATCTTTCAATGTTGCTCCCAAGGATTGGAGTTTTGGACAAAGCTTTGAAGGCAAGCAATTTGAGCCTTGA 855 0.5146 MSLTLFFFIFIITFTLFTFNSQSTSLFSSPSPPAAPFDSSSESSESSSSSYVEWLSAHATSYTAADSANALGGACGYSDGYGAAAATGLSEALFERGQICGACFELRCADEEAPFDRRWCIRGSSVIVTATDFCAPNYGFDADGESGGGRCNPPKQHFVIPIAAFEKIAIWKEGNLPVQYRRIKCRREGGMRFTITGSGIFISVLISNVAGTGEIVAVKIKGSRTGWLPMGRNWGQNWHVNALLQNQPLSFEVTDTDGKTVTSFNVAPKDWSFGQSFEGKQFEP* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0691 284 SUPERFAMILY PHL pollen allergen 187 279 IPR036749 -
Aev03g0691 284 PANTHER EXPANSIN-A15 38 283 IPR002963 GO:0009664
Aev03g0691 284 SUPERFAMILY Barwin-like endoglucanases 48 208 IPR036908 -
Aev03g0691 284 Pfam Expansin C-terminal domain 191 268 IPR007117 -
Aev03g0691 284 Gene3D - 191 282 IPR036749 -
Aev03g0691 284 Pfam Lytic transglycolase 88 180 IPR009009 -
Aev03g0691 284 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 200 279 IPR007117 -
Aev03g0691 284 SMART dpbb_1 86 180 IPR007112 -
Aev03g0691 284 Gene3D - 38 186 IPR036908 -
Aev03g0691 284 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 72 190 IPR007112 -
Aev03g0691 284 PRINTS Expansin signature 113 124 IPR002963 GO:0009664
Aev03g0691 284 PRINTS Expansin signature 189 201 IPR002963 GO:0009664
Aev03g0691 284 PRINTS Expansin signature 265 281 IPR002963 GO:0009664
Aev03g0691 284 PRINTS Expansin signature 236 257 IPR002963 GO:0009664
Aev03g0691 284 PRINTS Expansin signature 201 222 IPR002963 GO:0009664
Aev03g0691 284 PRINTS Expansin signature 126 136 IPR002963 GO:0009664
Aev03g0691 284 PRINTS Expansin/Lol pI family signature 90 108 IPR007118 GO:0005576
Aev03g0691 284 PRINTS Expansin/Lol pI family signature 227 241 IPR007118 GO:0005576
Aev03g0691 284 PRINTS Expansin/Lol pI family signature 67 85 IPR007118 GO:0005576
Aev03g0691 284 PRINTS Expansin/Lol pI family signature 173 189 IPR007118 GO:0005576
Aev03g0691 284 PRINTS Expansin/Lol pI family signature 265 279 IPR007118 GO:0005576
Aev03g0691 284 PANTHER EXPANSIN-A13 38 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0691 Aev-Chr3 5162855 5172452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0691 53 283 Expansin Gene Family AT3G03220 71.064 3.79e-122 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0691 - - adu:107481013 427.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0691 03 5162855 5172452 Aev03g0691 03 5162855 5172452 ECH