Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0672 ATGTCTCCACCACTGCTGGTTACTGAGGAGGAAGGGCAGAGCATCGCCTCAACCGTAGCATCTGCATCTTCACCGCAATCCTTGGACTGCTTCTCCCATAATGGGGCAGCATTGAAAGAACGCAACTACTTTGGATTGTCCGATTGCTCTTCGGTGGACAGTTCTACAGTCCCGAGCTTGTCTGGCAAGAAAAAAGTCAACCTGAATTTGAAGGCTACAGAGTTGAGGCTAGGCCTTCCAGGATCCCAATCACCTGAAAGGGATTCTCCAGATATTTTTTCATTGAGCAAAACAAAACTTGATGAGAAACCACTGTTCCCTTTGCTTCCTACGAAAGATGGAATCTGCTTGTTGTCCCAAAAGAATGTTGTTTCAGGCAACAAAAGAGGTTTTGCTGATGTCATGGATGGTTTCCCTGAGGGTGAGTTTCCTGGAACTACGGGGATAAATGGAATGCTATCACCTAGACCTTCCGGAGCTCAGCTGACTGCAACAACGGAAATACCACGCAAGGTATCCCAAGAACAGGCTGGTGTGGCAAATGGAACAGCTCATAACCATACGGGTGCTTCTATCAGTAGCAGTGCACCGGCTTCTAAGGCACAGGTTGTTGGTTGGCCTCCTATAAGATCATTTAGGAAAAACACATTGGCCACCACTTCAAAGAACAATGATGAAGTGGATGGAAAACCAGGTCTGGCCACTATCTTTGTAAAAGTCAGCATGGATGGTGCTCCCTATCTAAGGAAGGTAGATCTAAGAAATTATACAACATACCAGGAACTGTCTTCTGCTCTTGAAAAGATGTTCAGCTGTTTTACCTTAGGTCAGTGTGGTTCCCATGGGGCTCCAGGAAGAGAAATGTTGAGTGAGAGCAAGCTGAAGGACCTCTTGCATGGTTCAGAATATGTACTTACTTATGAAGATAAAGACGGTGACTGGATGCTTGTTGGAGATGTACCATGGGAGATGTTCATTGACACATGCAAGAGGCTAAAAATCATGAAGGGTTCTGATGCTATTGGCTTAGCTCCCAGGGCTATGGAAAAATCCAAGAGCAGGAGCTAG 1068 0.4588 MSPPLLVTEEEGQSIASTVASASSPQSLDCFSHNGAALKERNYFGLSDCSSVDSSTVPSLSGKKKVNLNLKATELRLGLPGSQSPERDSPDIFSLSKTKLDEKPLFPLLPTKDGICLLSQKNVVSGNKRGFADVMDGFPEGEFPGTTGINGMLSPRPSGAQLTATTEIPRKVSQEQAGVANGTAHNHTGASISSSAPASKAQVVGWPPIRSFRKNTLATTSKNNDEVDGKPGLATIFVKVSMDGAPYLRKVDLRNYTTYQELSSALEKMFSCFTLGQCGSHGAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDTCKRLKIMKGSDAIGLAPRAMEKSKSRS* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0672 355 Pfam AUX/IAA family 73 346 IPR033389 -
Aev03g0672 355 Gene3D - 232 349 - -
Aev03g0672 355 MobiDBLite consensus disorder prediction 1 20 - -
Aev03g0672 355 ProSiteProfiles PB1 domain profile. 235 339 IPR000270 GO:0005515
Aev03g0672 355 SUPERFAMILY CAD & PB1 domains 235 336 - -
Aev03g0672 355 PANTHER AUXIN-INDUCED PROTEIN 14 348 - -
Aev03g0672 355 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 14 348 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0672 Aev-Chr3 4978752 4982474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0672 249 335 B3 DNA Binding Superfamily AT1G19220 32.184 5.30e-08 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Aev03g0672 AUX_IAA 3.7e-90 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0672 K14484 - gmx:100789251 564.688