Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0654 ATGAGGAAACAGGTTTTGTTCTTGTGGTGGTTTGGAATGACCTTGAAGCTCTGTTTCTTCTTGCTCTCTGCATCATCTGAGAAAACATCATTCAGAAGAGGTTTAAGGGACATTAACAGCCTGGAACCAAAATCATCCTCAGATTTTGCGGTCAGGCTCAATACAGAAAACCATGAGCAGTTGGTGGTTGACAATGGAATCGTTTCCATCACTTTGTCAGTACCAGAAGGGTACGTCCTTGGAGTATCGTATAATGGAAATGACAATTTACTTGAAACTAAAAACGAAGAACAAGATAGAGGGTACTTTGACGTTGTTTGGAATCAACCAGGAAAAAATAGCATTTTTGAGAGAATCCACGGGACGAATTATTCGGTTGTTGCTGCTGACGAAAATCTGGTCGAGATTTCATTTTTAAGGACATGGACATCTTCCATGGAGGGCTCCAATGTCCCCATCAATATAGACATAAGGTACATTATGCGAAGAGGTGATTCAGGATTTTATTCATACGCAATATTTGATCGCCCTGAAGGATGGCCTGCAGTGGAAGTTGATCAAATTAGATTTGTTTACAAGCTCCTTGAAAACAGATTCAAGTATATGGCGTTATCGGAGAGCAGGCAAAGAAGCATGCCAACGATGAGAGATAGAGAAACGGGTGAAGTGCTGGCCTACAAGGAAGCTGTTCTCTTAACAAAACCAACTAACCCTGAATTTAGAGGAGAGGTGGATGACAAATACCAGTACTCATGTGAAAACACAGAAAACTCAGTTCATGGATGGATCACACTTGATTCTGAATCACCCGTGGGTTTCTGGATGATAACACCATCCAATGAGTTCCGAAATGGTGGGCCCATCAAACAAGACCTCACTTCACACGTTGGCCCCATCACTCTCTCTATGTTTGTGAGCACCCATTACGCTGGGAAGGAGGTAACAATGGCATTTAAAGAAGGGGAGAGTTATACGAAGGTTTTTGGCCCTGTTTTTGTTTACCTTAACTCTGCTTCTAGTGCTGCTGATTCACTTTCCCTCTGGTCAGATGCTGTGCAGCAGCTGTCCAAGGAAGTCCAAAACTGGCCTTACGATTTTCCACAATCACTAAGTTTCTATCATCCCACTCAACGAGGCACAGTATATGGAAGACTACTAGTCCAAGATAGGCACATTAAGGGAGGGAGGTTTCAAAATGCTAAAAATGCTTATGTTGGTCTGGCATTGCCTGGAGAACCAGGATCATGGCAAAAAGAGAGCAAGGGCTATCAATTCTGGACTCAAGCTGACTCCAAGGGATACTTCACAATTAAAAATATTGTACCAGGGGACTACAATTTGTATGCTTGGGTTCCTGGCTTTCTTGGTGATTACAAATATAATGAAACAATCACAATCGCACCAAGAGAAGGAATCAAAATTGATTCACTCATACATTATCCTCCAAGGAATGGACCTACCCTTTGGGAAATTGGGGTCCCTGATCGAAAAGCTTCAGAGTTCTATGTTCCAGATCCTTACCCTACGCTCATGAACAAATTGTACAATGAACAGAGGAGAGACAAGTTTAGGCAATACGGGTTGTGGGAGCGTTATACTGATTTGTATCCAAATGAAGATCTCGTTTACACTGTTGGTGTTGACCAGTATAGTAAGGATTGGTTTTTTGCTCATGTTACAAGGAGTACAGGAAATAGGACATACCAAGCAACGACATGGAAGATTATATTTGACCATAAATATGACATAATAAAAGGGAACTACACATTACAAATAGCCTTGGCCTCTGCCGCTGATGCTGACCTTCAGGTTCGGTTCAATGACCCCAATGTTTATCCACCCCACTTTGAAACAGGTCCAATAGGAGGAGACAATGCCATAGCAAGGCATGGCATCCATGGATTGCATAGGCTATTCAGTATTGACGTGCCTAGTGATTATTTAGTGAATGGGAAGAATACCATATATCTGAGGCAATCAAGAGCCTTAAACCCTTTCCAAGGACTTATGTATGATTATATCCGTTTAGAAAGACCACCAATAATCCCAACGAATTGA 2058 0.4193 MRKQVLFLWWFGMTLKLCFFLLSASSEKTSFRRGLRDINSLEPKSSSDFAVRLNTENHEQLVVDNGIVSITLSVPEGYVLGVSYNGNDNLLETKNEEQDRGYFDVVWNQPGKNSIFERIHGTNYSVVAADENLVEISFLRTWTSSMEGSNVPINIDIRYIMRRGDSGFYSYAIFDRPEGWPAVEVDQIRFVYKLLENRFKYMALSESRQRSMPTMRDRETGEVLAYKEAVLLTKPTNPEFRGEVDDKYQYSCENTENSVHGWITLDSESPVGFWMITPSNEFRNGGPIKQDLTSHVGPITLSMFVSTHYAGKEVTMAFKEGESYTKVFGPVFVYLNSASSAADSLSLWSDAVQQLSKEVQNWPYDFPQSLSFYHPTQRGTVYGRLLVQDRHIKGGRFQNAKNAYVGLALPGEPGSWQKESKGYQFWTQADSKGYFTIKNIVPGDYNLYAWVPGFLGDYKYNETITIAPREGIKIDSLIHYPPRNGPTLWEIGVPDRKASEFYVPDPYPTLMNKLYNEQRRDKFRQYGLWERYTDLYPNEDLVYTVGVDQYSKDWFFAHVTRSTGNRTYQATTWKIIFDHKYDIIKGNYTLQIALASAADADLQVRFNDPNVYPPHFETGPIGGDNAIARHGIHGLHRLFSIDVPSDYLVNGKNTIYLRQSRALNPFQGLMYDYIRLERPPIIPTN* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0654 685 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 54 680 - -
Aev03g0654 685 Gene3D - 375 475 - -
Aev03g0654 685 SUPERFAMILY Galactose mutarotase-like 55 343 IPR011013 GO:0003824|GO:0005975|GO:0030246
Aev03g0654 685 CDD RGL4_M 377 477 IPR029413 -
Aev03g0654 685 SUPERFAMILY Starch-binding domain-like 374 473 IPR013784 GO:0030246
Aev03g0654 685 Gene3D - 485 677 - -
Aev03g0654 685 Pfam Polysaccharide lyase family 4, domain III 487 676 IPR029411 -
Aev03g0654 685 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 54 680 - -
Aev03g0654 685 SUPERFAMILY Galactose-binding domain-like 484 677 IPR008979 -
Aev03g0654 685 CDD RGL4_N 60 334 - -
Aev03g0654 685 Gene3D - 53 356 IPR014718 GO:0030246
Aev03g0654 685 CDD RGL4_C 489 677 - -
Aev03g0654 685 Pfam Rhamnogalacturonate lyase family 47 244 IPR010325 -
Aev03g0654 685 Pfam Polysaccharide lyase family 4, domain II 401 470 IPR029413 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0654 Aev-Chr3 4831353 4838951 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0654 47 680 Polysaccharide Lyase AT1G09910 53.459 0.0 710
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0654 K18195 - gmx:100776664 1083.94