Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0653 ATGTACACAATAATGGAGCGTAAGAAAGATTTTCCAGCACTGGAAATTGATCACATCAGAATTGTTTTCAAGCTCGATAAGAACAGGTTCCGTTACATGGCTATATCAAATGATATGCAACGAGTGATGCCATCGGCAGAAGAAAGAGGAAGAGGGAAGCGTCTTGGTTTTGCTGAAGCTGTTCTAATAACTAACTCTCCTGACCCTAATATTAAAGGAGAGGTTGATGACAAATACCAATACTCTAGTGAGAACGAAGAGAATAGTCTTCATGGATGGGTTAACTCTGACAGTATCGTTAACAAATCGGTGGGCTTCTGGATGATAACACCAAGTAGCGAGTTCCGCAACGGTGGCCCAATCAAGCAAGCCCTCACTTCTCATGTTGGCCCTACCATTCTCAACATCTTACATAGCACTCATTATGCCGGGAAGGAGGCAACCATGGCATTTCAAAAAGGGGAAACTTTCAATAAAGTTTATGGCCCCGTTTTTGTCTACCTCAACTCTGTTCCAAGTGCTCACAGCCAACATGCTCTTTGGGCTGATGCTTCAACACAGCTATCTGAGGAAGTTAGAAGCTGGCCGTATAATTTCCCTAAATCAAATGATTTTGTCCCATCCGACAAACGAGGAGCAGTGGAAGGAACATTACAAGTCAATGACCGAGGCAGCAAATTGTTCTACGCCGAGAACGCTTATGTTGGTCTGGCTCTTCCTGGAGATGTGGGATCATGGCAAAGACAAAGCAAGGGGTACCAATTCTGGACGCGGGCAAACAAGGAAGGTTACTTTAGAATTGAAAAAGTTGTACCTGGGGACTACAATTTGTATGCATGGGTTCCTGGTGTTTTTGGTGATTACAAATATAACTCTACCATAACAATCAATCCAGGACGTGAGATGTTATTGCGTTCGGTAATATTGACTACTCCAAGAAATGGACCTACAATATGGGAAATTGGCATCCCTGATCGCTCTGCTGCAGAATTCTATGTCCCACACCCATACCCTAACCTCATCAACCGATTATTTCTTGGAAAACCAAAACACAGGTTTAGGCAATATGGGTTGTGGCAACGTTACAGTGATTTATATCCACTTCGTGACCTTATTTACCATGTCGGTACTAGTAACTATAAAACAGATTGGTTCTATGCTCATCTTACAAGGAATGTAGGAAATAACACATTTAAACCAACAACATGGGAAATTAGGTTCCATCTCCCTAATGTTATAAGAGGAAATTACACACTCCAGCTTGCCTTAGCCTCAGCCTCAACTTCTAACTTGGCGGTACGGATGAATAAGGCATCAGCAGTTAGGCCAATGTTTGCGACGGGAGCAATAGGGCAAGACAATTCAATAGCAAGACATGGAATCCATGGATTGTACAGACCTTATAGCATTGAAGTACCAAGTGATGTGTTACTAAAAGGAAATAACAGCATCTATCTAAGACAAACAAGAGGCTTAAGTCCTTTCCCAGGAATTATGTATGACTATATCCGTTTCGAAAGCCCTACTCTATAG 1533 0.422 MYTIMERKKDFPALEIDHIRIVFKLDKNRFRYMAISNDMQRVMPSAEERGRGKRLGFAEAVLITNSPDPNIKGEVDDKYQYSSENEENSLHGWVNSDSIVNKSVGFWMITPSSEFRNGGPIKQALTSHVGPTILNILHSTHYAGKEATMAFQKGETFNKVYGPVFVYLNSVPSAHSQHALWADASTQLSEEVRSWPYNFPKSNDFVPSDKRGAVEGTLQVNDRGSKLFYAENAYVGLALPGDVGSWQRQSKGYQFWTRANKEGYFRIEKVVPGDYNLYAWVPGVFGDYKYNSTITINPGREMLLRSVILTTPRNGPTIWEIGIPDRSAAEFYVPHPYPNLINRLFLGKPKHRFRQYGLWQRYSDLYPLRDLIYHVGTSNYKTDWFYAHLTRNVGNNTFKPTTWEIRFHLPNVIRGNYTLQLALASASTSNLAVRMNKASAVRPMFATGAIGQDNSIARHGIHGLYRPYSIEVPSDVLLKGNNSIYLRQTRGLSPFPGIMYDYIRFESPTL* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0653 510 CDD RGL4_M 210 301 IPR029413 -
Aev03g0653 510 Gene3D - 314 506 - -
Aev03g0653 510 Gene3D - 206 304 - -
Aev03g0653 510 SUPERFAMILY Galactose-binding domain-like 314 506 IPR008979 -
Aev03g0653 510 SUPERFAMILY Galactose mutarotase-like 16 177 IPR011013 GO:0003824|GO:0005975|GO:0030246
Aev03g0653 510 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 1 509 - -
Aev03g0653 510 CDD RGL4_C 319 506 - -
Aev03g0653 510 CDD RGL4_N 1 176 - -
Aev03g0653 510 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 1 509 - -
Aev03g0653 510 Pfam Polysaccharide lyase family 4, domain III 317 504 IPR029411 -
Aev03g0653 510 Pfam Polysaccharide lyase family 4, domain II 231 301 IPR029413 -
Aev03g0653 510 SUPERFAMILY Starch-binding domain-like 206 300 IPR013784 GO:0030246
Aev03g0653 510 Pfam Rhamnogalacturonate lyase family 1 75 IPR010325 -
Aev03g0653 510 Gene3D - 1 184 IPR014718 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0653 Aev-Chr3 4821954 4825824 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0653 2 509 Polysaccharide Lyase AT1G09890 53.502 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0653 K18195 - gmx:100792575 770.77