Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0619 ATGCTCCCACCGAGTTACGACGACTCATCCAACCCCTCCCGAGTCAAAATGCCGACTCATCATGGACAAGGAGGAGAACTACCTTCCGTGGCGCTCCCTACGCGCAACAGCGGCAAGGGAAGGTACAGAGAGTGCCTCAAGAACCACGCGCTCTCCATCGGAGGCCACGCGCTTGACGGCTGCTGCGAGTTCATGCCCGCCGGAGCTGACGGCACACTCGACGCACTCAAATGCGCCGCCTGTAACTGCCACCGCAACTTCCACCGCAAGGAAATCACCGACACCGCACCCCCAGCCGTAGGCGCAGACCCTTACCTCCTCCCTCCTCATCACCCACACAACAACCCTTACCATAACCGTCACCACCAGCAACCGTTTCCGCAATTCGCGGCGTGTTATCGGGCCCAAGGTGCGGGGTACCTTCACGTGGCGGGACAGCAGAGAGGAGGCAGCGGAGCACCACCACCCGCCACGCTGGCACTGCCGTCGATCTCCGGTGCTGGCGGCGGGACCCAGAGCACGAAGGACGAGCATGAGGAAGTTTCAGAACCGAGTGGAGGTGGGGGTGGAGGATCGTCGTCGTCGAAGAAGAGGTTCAGGACGAAGTTCACGCAGGAGCAGAAGGATAAGATGCTGGATTTGGCGGAGAAGCTTGGGTGGAGGATTCAGAAGCATGACGACGTTGCGGTGCAGGAATTCTGCCAAGAGACTGGGGTGAAGCGTAGTGTGTTCAAGGTTTGGATGCATAACAACAAGCACACCCTCGGTAAGAAGCCCTAG 780 0.5974 MLPPSYDDSSNPSRVKMPTHHGQGGELPSVALPTRNSGKGRYRECLKNHALSIGGHALDGCCEFMPAGADGTLDALKCAACNCHRNFHRKEITDTAPPAVGADPYLLPPHHPHNNPYHNRHHQQPFPQFAACYRAQGAGYLHVAGQQRGGSGAPPPATLALPSISGAGGGTQSTKDEHEEVSEPSGGGGGGSSSSKKRFRTKFTQEQKDKMLDLAEKLGWRIQKHDDVAVQEFCQETGVKRSVFKVWMHNNKHTLGKKP* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0619 259 Gene3D - 181 256 - -
Aev03g0619 259 SUPERFAMILY Homeodomain-like 182 257 IPR009057 -
Aev03g0619 259 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 41 92 IPR006456 -
Aev03g0619 259 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 1 34 258 - -
Aev03g0619 259 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 34 258 - -
Aev03g0619 259 MobiDBLite consensus disorder prediction 1 17 - -
Aev03g0619 259 Pfam ZF-HD protein dimerisation region 41 92 IPR006456 -
Aev03g0619 259 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 42 91 IPR006456 -
Aev03g0619 259 MobiDBLite consensus disorder prediction 144 200 - -
Aev03g0619 259 MobiDBLite consensus disorder prediction 1 34 - -
Aev03g0619 259 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 196 252 IPR006455 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0619 Aev-Chr3 4591216 4591995 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0619 38 255 ZF-HD Transcription Factor Family AT4G24660 50.917 9.17e-66 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Aev03g0619 ZF-HD_dimer 5.4e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0619 - - gmx:100798992 278.87