Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0589 ATGGAGGAGGGAATGTACGGATTGGCGTCAACGGCGGAGTACTCGGACAAGGCGCCTATGACGCCGGAGAATCTGATATTCCCGGCGGAGTACCAGAGCTACCTGATGTCAGGCCGGATTCCGATGTTCGGATCGGAGGAGCTTCTGTCCGGCGCAACGGAAGCGGAACCTTCGTCAAACAACTTGATGAGCAGCAGCACTACTCATCCTCTTCCCCAAATTCAGCGTCACAGTAGTTGCGACGCCGCGTCGTCTCTGATCAAAGCCAAAATCGCATCTCACCCTCACTACCCTCGCCTCCTCCAAGCCTACATCGACTGCCAGAAGGTGGGAGCGCCTGCAGAGATAGCGAGTTTGTTAGACGAAATCCAAAGGGAAAACGACTTTTGCAAGAGCAGGGACGTTGTTGGTTCCACGTGCATAGGAGCCGATCCCGAGCTCGATGAGTTCATGGAAACATACTGTGAGATGTTGGTGAAGTATAAGTGTGATCTGACGAGGCCTTTTGATGAAGCCACCAGCTTCCTCAACAAGATCGAAACTCAGCTCAGCAATCTCTGCTGCACTACTACTGCTGCTGCTTCCGCTCACCCACTTTCCGATGATGGGGGTGTGTCATCGGAAGAAGAGCTGAGTGGTGGAGATGGTGATGGGCAATTACGGGACGAAGATGGCGATCTTAAGGACAAGCTTCTACGCAAGTTCGGTAGTCACATTGGTACTCTGAAATTGGAGTTCTCTAAGAAGAAAAAGAGGGGCAAGCTCCCCAAAGACGCTAGGCAAACTCTGCTTCAGTGGTGGAATACTCACTACAAATGGCCTTACCCAACGGAAGCTGATAAGATAGCGCTAGCGAAGTCAACTGGGCTAGATCAGAAGCAAATAAACAACTGGTTTATTAATCAGAGAAAGCGCCATTGGAAGCCATCAGAGAATATGCAGTTTAATTTCTGTGATGGACAGATAATCTGA 972 0.5041 MEEGMYGLASTAEYSDKAPMTPENLIFPAEYQSYLMSGRIPMFGSEELLSGATEAEPSSNNLMSSSTTHPLPQIQRHSSCDAASSLIKAKIASHPHYPRLLQAYIDCQKVGAPAEIASLLDEIQRENDFCKSRDVVGSTCIGADPELDEFMETYCEMLVKYKCDLTRPFDEATSFLNKIETQLSNLCCTTTAAASAHPLSDDGGVSSEEELSGGDGDGQLRDEDGDLKDKLLRKFGSHIGTLKLEFSKKKKRGKLPKDARQTLLQWWNTHYKWPYPTEADKIALAKSTGLDQKQINNWFINQRKRHWKPSENMQFNFCDGQII* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0589 323 Pfam KNOX1 domain 87 128 IPR005540 GO:0003677|GO:0005634
Aev03g0589 323 MobiDBLite consensus disorder prediction 51 71 - -
Aev03g0589 323 ProSiteProfiles 'Homeobox' domain profile. 246 309 IPR001356 GO:0003677
Aev03g0589 323 SMART HOX_1 248 313 IPR001356 GO:0003677
Aev03g0589 323 Pfam ELK domain 226 247 IPR005539 GO:0003677
Aev03g0589 323 SMART KNOX1_2 85 129 IPR005540 GO:0003677|GO:0005634
Aev03g0589 323 MobiDBLite consensus disorder prediction 52 71 - -
Aev03g0589 323 Pfam KNOX2 domain 140 187 IPR005541 GO:0003677|GO:0005634
Aev03g0589 323 SMART KNOX2_2 137 188 IPR005541 GO:0003677|GO:0005634
Aev03g0589 323 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 1 319 - -
Aev03g0589 323 ProSiteProfiles ELK domain profile. 226 246 IPR005539 GO:0003677
Aev03g0589 323 SMART ELK_2 226 247 IPR005539 GO:0003677
Aev03g0589 323 MobiDBLite consensus disorder prediction 198 223 - -
Aev03g0589 323 Gene3D - 245 316 - -
Aev03g0589 323 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 1 319 - -
Aev03g0589 323 Pfam Homeobox KN domain 266 305 IPR008422 GO:0003677|GO:0006355
Aev03g0589 323 CDD homeodomain 258 310 IPR001356 GO:0003677
Aev03g0589 323 ProSitePatterns 'Homeobox' domain signature. 284 307 IPR017970 GO:0000981|GO:0006355
Aev03g0589 323 SUPERFAMILY Homeodomain-like 247 318 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0589 Aev-Chr3 4339767 4347890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0589 3 319 Homeobox Transcription Factor Family AT1G23380 63.939 1.61e-135 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Aev03g0589 KNOX2 1.6e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0589 - - adu:107481351 455.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0589 03 4339767 4347890 Aev03g0589 03 4339767 4347890 ECH
Aev05g0935 05 6585110 6588538 Aev03g0589 03 4339767 4347890 PCT