Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0580 ATGTCAACACTGACCCATCTTTTTGATCTTCCTGAACAGATATGTTATGTGCAATGTGGATTCTGCACTACCATCTTAATGGTCAGTGTTCCATGCAGCAGTTTGTCAATGGTGGTGACAGTAAGATGTGGCCACTGCACAAGCCTCCTCTCTGTTAATATGTTGAAAGCTTCTTTTGTCCCTTTCCACCTTTTAGCTTCCCTTACCCATCTTCAGCCAAAAGATGGTAGTACACATGATGAGGAAGCAAACAAGACTATGAACAACCACAATGAATCATCCATGAATTGTTCTGATTATTGTGAGGAAGAGAACCTTACTCCAATGGCCATTGTTGTGAATAAACCACCAGAGAAGAGACAGAGAACACCATCTGCATATAACTGCTTCATCAAAGAAGAGATTAAAAGGCTAAAGGCTGAAAACCCTGCCATGGCCCACAAAGAAGCTTTTAGTACTGCTGCAAAAAATTGGGCCAACTTCCCTCAATCTCAGTACTGTAGAGAAGGTGATGAAGAAGAGAGTTGTAGCCAAATTGATGACCAAATTGTGGATCTTGATTCACATGATGATGCTAAGGTGAATGAAGAAGGGGAAAGTGGTGGTTTCCGTGGAAGAAAGGTTCCAAGGAACTCAATATTGGCAAGAACATACACCGTTTGA 663 0.4163 MSTLTHLFDLPEQICYVQCGFCTTILMVSVPCSSLSMVVTVRCGHCTSLLSVNMLKASFVPFHLLASLTHLQPKDGSTHDEEANKTMNNHNESSMNCSDYCEEENLTPMAIVVNKPPEKRQRTPSAYNCFIKEEIKRLKAENPAMAHKEAFSTAAKNWANFPQSQYCREGDEEESCSQIDDQIVDLDSHDDAKVNEEGESGGFRGRKVPRNSILARTYTV* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0580 220 PANTHER AXIAL REGULATOR YABBY 4 1 188 - -
Aev03g0580 220 Gene3D High mobility group box domain 112 169 IPR036910 -
Aev03g0580 220 Pfam YABBY protein 11 166 IPR006780 GO:0007275
Aev03g0580 220 SUPERFAMILY HMG-box 113 165 IPR036910 -
Aev03g0580 220 PANTHER PROTEIN YABBY 6-RELATED 1 188 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0580 Aev-Chr3 4236700 4239603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0580 2 217 C2C2-YABBY Transcription Factor Family AT1G23420 55.507 4.40e-72 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Aev03g0580 YABBY 3.7e-62 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0580 K25796 - gmx:100804172 326.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0580 03 4236700 4239603 Aev03g0580 03 4236700 4239603 ECH
Aev05g0019 05 147198 148842 Aev03g0580 03 4236700 4239603 PCT