Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0577 ATGGGGAAGGGGCAAGTGAAGATGAAGGCAGTAGTGTATGCACTATCACCATTTCAGCAAAAAGTGATGAGTGGCCTTTGGAAGGACATTCCCGGCAAAATTAACCAGAAACTCTCTCAGAATTGGCTCAACTCACTCCTCTTCATCACCCCCATTCTTGCCACCTACACGTATTTGATTGTGAGGAACGTTCCAGCATTGGGTTGTGGGGATGATTTGCTGCAACTGTTTTCATCCTATGGAGAAGTTGAAGAGTGTAAGCCAATGGATGCAGAAGATTGTGAGCAATACACTGATGTCTACTGGATCAAATTCCGAGTTTTCAGCAATGCAAGGTTTGCCAAAAGAAAATTGGATGAATTTGTTTTCCTTGGAAATCGACTGCAGGTTTCATATGCTCCCCATTTCGAGACTCTATCTGACACAAAGGATAAGTTAGAGGGAAGAAGAAGGGAGGTTTTAGCACGATTGAATCCTAGAAGATCCAAAGAGACTGCTACCTCAAGCTCTGGACCTATGAATAAGAGTGATGCAGTTGCCACTCCTCCAAATACCAGTTTTGTATCAGAACATTTTGATTGTAACGAAAGGGATGTAGAATCCAGAGGCAAATCACAACGTGATAATCTTCCAATGACAACGGTTTCCTCTAATGAGGATTATTTTTCTTCCAATTCCATGAATCAAACAGTGAGGTTAGTCCGGGATAAGCTTGATAAGATTCGATCAAGTGGCGAGCATCTACAACCGGGATCTGCATCGAAGAAAGCAAGAGTTGATAATAGGAGGAGGATTTAA 798 0.4236 MGKGQVKMKAVVYALSPFQQKVMSGLWKDIPGKINQKLSQNWLNSLLFITPILATYTYLIVRNVPALGCGDDLLQLFSSYGEVEECKPMDAEDCEQYTDVYWIKFRVFSNARFAKRKLDEFVFLGNRLQVSYAPHFETLSDTKDKLEGRRREVLARLNPRRSKETATSSSGPMNKSDAVATPPNTSFVSEHFDCNERDVESRGKSQRDNLPMTTVSSNEDYFSSNSMNQTVRLVRDKLDKIRSSGEHLQPGSASKKARVDNRRRI* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0577 265 PANTHER UNCHARACTERIZED 57 265 IPR039599 -
Aev03g0577 265 MobiDBLite consensus disorder prediction 152 228 - -
Aev03g0577 265 MobiDBLite consensus disorder prediction 242 265 - -
Aev03g0577 265 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 57 135 IPR000504 GO:0003723
Aev03g0577 265 Gene3D - 4 59 IPR036642 GO:0005750|GO:0006122
Aev03g0577 265 MobiDBLite consensus disorder prediction 161 190 - -
Aev03g0577 265 Pfam Cytochrome b-c1 complex subunit 8 1 58 IPR020101 GO:0005750|GO:0070469
Aev03g0577 265 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 59 128 IPR000504 GO:0003723
Aev03g0577 265 MobiDBLite consensus disorder prediction 206 228 - -
Aev03g0577 265 MobiDBLite consensus disorder prediction 191 205 - -
Aev03g0577 265 Gene3D - 60 150 IPR012677 -
Aev03g0577 265 SUPERFAMILY RNA-binding domain, RBD 53 136 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0577 Aev-Chr3 4220145 4223583 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0577 1 58 Chloroplast and Mitochondria Gene Families AT5G05370 62.069 1.28e-24 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0577 K24824 - gmx:100527829 301.982