Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0562 ATGTTGCCTAGTTCTGCTCCAACACCAACCCCTGCGGTTGAAGCCAATCCCCCAAAACCTGCTCCGTCGTCTCCGCCGCCGAAGAATGCCGTGTCGCCGCCTCCTTCAAATAGTACACAGCCGTCAAAAAATGTTGCTCCTCCTCCGGTGAACTCACCACCTCCTTCAAAACAACCACCACCACCACCACCACCATCAGCACCGCCACCGTCTTCACCACCGCCGTCTTCGGCACCGCCACCAATGCAAAATGGCAACTACAGCAACTCTTCTACCGCTGATTCTCCTCCTCCACGAAGTGGGTCACCTCCACCTCCTCCATCTTCACATGCCATTGCGCCTTCTGCAACTAATTTAACCCACTCGCCTCCACCAACGGGAATTGCCGGTAGTGGCGGTGGTGGTGGCGGCGGCGGCGGTGGCGCACCCTCCTCACGGGCACCACCAAGGGGGTATTATTATCATGAGAGCTCATCATCATCAGATCCAGTAAAATATGTTGGGTTTACTCTCGCCGCGGTGTTCATTGTTGCCTTAGTTGCTGTAGCTTTTCTCGCATTTAGGAAGAAGAAATCAAAAGGGATTCACTATGTTCCACCCTACGGGCCTCCCCCTCATCTTCAATTTCTCATGAAACCAGGTGTTGATGGACTTTACTATGGAACGCAACCTGGTCCACAATCTCCCTTTGGAAGTGGGAGGAATCTCGTACGAAGTGCGAGTCAACTAGGAACAACTTTAGACCAGGCCATGAGTTCTCAGATAGCATTTACCTATGACACGGTCATGGAGATGACTGATTCATTCTCTAGTCAAAATGTTATTGGGGAAGGCGGATTTGGCTTTGTTTACAAGGGCTTTCTTCCGGATGGAAAGGCGGTCGCGGTTAAGCAGCTTAAGGCTGGCAGCCTGCAGGGAGAAAGGGAATTCAGGGCTGAAGTGGAGATCATCAGCCGTGTCCATCATCGCCATTTGGTCTCCTTGGTTGGTTATTGCATATCTGATTACAACAGGATACTTATCTATGAGTTTGTTCCTAATGGAACACTCCATCATCACTTGCATGCAAGTTCAATGCCAGTGTTGGACTGGGACAAGAGGCTGAAGATCGCGATTGGCGCTGCAAAGGGCTTGGCATATCTGCATGAGGACTGCAGCCAAAAGATTATTCACAGAGATATTAAGTCAGCAAACATACTTTTGGATGACGCTTTTGAGGCTCAGGTTGCAGACTTTGGACTTGCGAGGCTAACTGATACTGCTAATACACATGTATCAACTAGGGTCATGGGGACCTTTGGGTACATGGCTCCAGAATATGCGACAAGTGGAAAATTAACGGATAGATCTGATGTTTACTCATTTGGGGTTGTTCTTCTTGAGCTTGTAACTGGAAAGAAACCAGTTGATGACACTCGGCCTCTGGGAGATGAGAGTTTGGTTGAGTGGGCTCGCCCACTTCTTCTTCATGCAATAGAGACACATGAGTGCAGGGAGCTAATAGACCCGAGGCTTGAAAATAACTATGTGCAGAGTGAAATGTTCAAAATGATTGAGGCGGCCGCAGCTTGTGTTCGCCACTCAGCTCCTAAACGGCCTCGTATGGTTCAGGTGGTAAGAGCCTTAGATTGTGGAGATGAAATATCTGATCTGTCAAACGGGGTAAAGTATGGTCAGAGCACTGTTTACGATTCCGGCCAGTATGATAAAGACATCATGATATTCAGGAAAATGATCAATGGCAGCTATGTTGAATCTGAACCCGATTGGTACGGTAGAGAATTCGGTCCGGAATCTGGATCCCAACAGGCATTGATGCCAAATAGTACTAGTGTTGAGTCAGAATCCAAAACTTTCAACAAGCAAAGGAGCACTAAGAAATGA 1884 0.4851 MLPSSAPTPTPAVEANPPKPAPSSPPPKNAVSPPPSNSTQPSKNVAPPPVNSPPPSKQPPPPPPPSAPPPSSPPPSSAPPPMQNGNYSNSSTADSPPPRSGSPPPPPSSHAIAPSATNLTHSPPPTGIAGSGGGGGGGGGGAPSSRAPPRGYYYHESSSSSDPVKYVGFTLAAVFIVALVAVAFLAFRKKKSKGIHYVPPYGPPPHLQFLMKPGVDGLYYGTQPGPQSPFGSGRNLVRSASQLGTTLDQAMSSQIAFTYDTVMEMTDSFSSQNVIGEGGFGFVYKGFLPDGKAVAVKQLKAGSLQGEREFRAEVEIISRVHHRHLVSLVGYCISDYNRILIYEFVPNGTLHHHLHASSMPVLDWDKRLKIAIGAAKGLAYLHEDCSQKIIHRDIKSANILLDDAFEAQVADFGLARLTDTANTHVSTRVMGTFGYMAPEYATSGKLTDRSDVYSFGVVLLELVTGKKPVDDTRPLGDESLVEWARPLLLHAIETHECRELIDPRLENNYVQSEMFKMIEAAAACVRHSAPKRPRMVQVVRALDCGDEISDLSNGVKYGQSTVYDSGQYDKDIMIFRKMINGSYVESEPDWYGREFGPESGSQQALMPNSTSVESESKTFNKQRSTKK* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0562 627 Gene3D Phosphorylase Kinase; domain 1 233 344 - -
Aev03g0562 627 MobiDBLite consensus disorder prediction 97 111 - -
Aev03g0562 627 MobiDBLite consensus disorder prediction 601 618 - -
Aev03g0562 627 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 12 599 - -
Aev03g0562 627 ProSitePatterns Protein kinases ATP-binding region signature. 275 297 IPR017441 GO:0005524
Aev03g0562 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 389 401 IPR008271 GO:0004672|GO:0006468
Aev03g0562 627 SMART serkin_6 269 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev03g0562 627 Gene3D Transferase(Phosphotransferase) domain 1 345 556 - -
Aev03g0562 627 SUPERFAMILY Protein kinase-like (PK-like) 251 542 IPR011009 -
Aev03g0562 627 MobiDBLite consensus disorder prediction 1 81 - -
Aev03g0562 627 MobiDBLite consensus disorder prediction 82 96 - -
Aev03g0562 627 Pfam Protein tyrosine and serine/threonine kinase 272 542 IPR001245 GO:0004672|GO:0006468
Aev03g0562 627 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK13-RELATED 12 599 - -
Aev03g0562 627 ProSiteProfiles Protein kinase domain profile. 269 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev03g0562 627 MobiDBLite consensus disorder prediction 590 627 - -
Aev03g0562 627 CDD STKc_IRAK 275 543 - -
Aev03g0562 627 MobiDBLite consensus disorder prediction 1 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0562 Aev-Chr3 4141127 4145145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0562 168 595 Trihelix Transcription Factor Family AT1G70460 61.573 0.0 539
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Aev03g0562 PK_Tyr_Ser-Thr 2.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0562 - - gmx:100797563 636.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0562 03 4141127 4145145 Aev03g0562 03 4141127 4145145 ECH