Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0549 ATGGCGGATTCCGCCTCTTCTCCCGCGCCAACCCTAGAACCCAAACCACAAACCTCCGGATCGGCAACTCCGAATCCCAACCCAAACCAACCCGATCCACCTCCCACTTCCACATCGCTCTCGCCATCTCCAGCTCCAGCTCCCGCCGCGCCAAACCCTAATCCCAATCCACTTATACTCTCCGCGCCACCTCCTCCGCCCCTCTCGCAGCACCACCACCCCACTTTTTCCTACACGCCGCCGCAGGTCGCCGCCGGAGCTGCCTTCGCTCCTCCAGCTGCGCCGTCCTTCAGGGTGCTACCTCCGCAGGCGCCGCAGTTCTCCACGTTGCCCAATCATGCCGCTGCTTCTGTGCCGCCGAATCTCGTATACCAGAATCCCTCGGTTCCGCCGCCTGGAGTGAGCTCTGCTGGCTCGATGGCTCCTGGTGTCGCAGCTGCCTCCGGTGGCGTGGCCGTTCCTGCATCGGTGCCGCCGATGCAGCCAATGATGTCGTACCAGGTTCCTCCCGGTCAGCCTGCCATCCCGACACTGAGACCGCAGTACTTGCCGATGCCGAACGGTTACGCTGCCGTCCCGGGAGCTCCGCAAGGGACTGTACCTCCTGCAGGAATGCCTCGTTTTCCACCTCCATACGGAGCTATGGTTCGGCCTCCTGTATATCCTCCACGTGCACCTGGAGCAGTTAATGTTCTTCCAGTATCACGCCCAGTTGTTGCAGGAGTCCTTGCAGTTCGTTCTATTATTCCTCCTGTTGTCAGACCTGTGGTTGCCCCGAGTATTACTCCTGCTGAGAAGCCACAAACCACAGTTTGGGTTGGCAAGATTGCACCAACAGTGGAAAATGATTTTATGCTTTCTATTCTTCAGATATGTGGACCAGTTAAGAGCTGGAAACGTCCTCAAGATTTATCAAATGGAACTCCTAAAAGCTTTGGATTTTGTGAGTTTGAGACTGAGGAAGGGGTTCTTCGTGCCTTGCGTCTGCTTACTAAATTGAATATTGATGGGCAGGAGCTAATGCTCAATGTCGATAAAAATATGAAAGAACACCTGGAGCGATATGTTGTGAAAAAGACCGAAGATAAGAAAAAAGAAGCTCAGGTAGCAGGAGCTGAAAAAAATGATGACAGTGCACAACTTGCTGATGCAGATGGGGATGGGAAATCTGATGCAGAGCACTTAAACAAAGATGATAAAGATTCAGGCAACAAGGATTCCCCTGATTTCACAACCTTTGGCATTGTCACTGATGAAGATAGGGAAGCTGATAGAGAGGCTTCAGAAAAGATTGCAAACATGATAGAAGAGAGGTTGAAAACAAGACCTGTGCCTGCAGCTCCTGTACAAGCAGCTGGCGATGGCTCTGCAATGTCATCAGAACAACCAGAAAAAAGAAGAGATGGAGACTCTGATGTGGGTATGGGGAGGAATGAAGCAGCTGATGATAAAAACGAGAAAGATACAAACAGTGACGTCAAACCAAGTAGTGAACATAATAGACCTGAGACTCCTGATAGAAGGCATGATAGGAAAAGCCGAGAGAGAGACCGAGATAGGGAACTAAAACGAGAAAAGGAAAGGGAACTTGAAAGGTATGAAAGAGAAGCAGAGCGAGAACGTATCAGGAAAGAGAGGGAACAAAGAAGGAGGATTGAGGATGCTGAACGTCAGTATGAAGCGTGCTTGAAGGAGTGGGAGTATAGAGAAAGAGAGAAAGAGAAAGAACGCCTATATGAAAAGGACAAGGAAAAGGAAAGAGAACGCAAACGGAGAAAGGAGATACTATATGATGAAGAGGATGAGGATGATGATTCAAGGAAGCGGTGGCGTAGAAGTGCCTTAGAGGAGAAGAGAAAGAAGAGGCTGCGTGAAAAGGAAGATGACATGGCTGACAGACAAAAAGAAGAGGAAGAAATTGCCGAGGCCAAGAAGAGGGCTGAGGAGGATCAGGAGCGGCAACAGCAGAGAGATGCACTGAAACTATTATCCGACCACCATCTTGTAAATGGTGGTGAAAAGGCTATGGCTTCTGAAGAGATTACTAATGAAGTCAACTATGTTGTTACTGAACACAGTACTGCACCTGATTATAGTCATGAGGGTCATATAGGTGATGCTAATTCACTAAACACTATCAATGATGAATCAGCCAATGCATCTGTTGCTGAAACGGATACGCGGTCAAGTGCAAATGCTCCTGCAAAGAAGTTGGGATTTGGACTAGTTGGGTCTGGAAAAAGAACAACTGTCCCCTCTGTTTTCCATGAGGACGAAGATGATGATGCACACAAGGACAAAAAGATGAGGCCCTTGGTTCCAATTGATTACTCAACTGAGGAACTGCAAGCTGTTCAACCTACTGCTTCTGGGCCAACACCGCCAAATTTGGCTGCAGCCGCTGAATTTGCAAAGCGTATATCCAGTGCCAATCTCAAAGAAGAGAAGCTTGATGGTGAACGGGATCGAAGTAAGCGTTCAAATGAGAAGTCTAGTCACCGTGACAGGGACAGGAATGATGAAGATGGCCCTCACAACAGAGATGAACACAAGGAGAAAACTGACCGTGGCAGAGATCGAGATCATGGGTTGGAGAAACCAAAGACTTCAGATAACAAGAGACTCTTAGATGCAAAACAGTTAATTGATATGATTCCAAAGACCAAGGAAGAGTTGTTCTCGTATGAGATAGACTGGGCAGTTTATGACAAGCATGACTTGCATGAAAGAATGAGGCCGTGGATTTCAAAGAAAATCAAAGAGTTTTTGGGCGAAGAGGAAAATACATTGATAGATTACATTGTTTCGAGTACACAAGAACACGTGAAAGCGTCGCAGATGCTAGAACGTCTTCAGATCATATTAGATGAAGAAGCTGAAATGTTCGTACTCAAGATGTGGAGGATGCTTATCTTCGAAATTAAGAAGGTAGAGACAGGGCTTGCTCAGAGCTCAGATTGTGAACAGCACAACAATTGGGGAGGATTTATCAGTACCTGTTGTGGCCTATATTTTGATGATTACCTCTCTGCCTTAGGGCTTCATGCCAACCAAACTGGAAAAGTATTCTTGAATTCCTCAGAGCAAGAAAAGTGCTTATCTCAAAAATATTTCACAGGCTGTGGGATAGAGAAGTTAACTAGTGGAAATGGTGGTTGCTCAGATTACACTGTTATGGATGTTATTAACAAGTTTGAAGACAGATTGAGGAGATTAGATGAAGATTGTATGCATTTAAGTATAAATGGCAGGCCAAATGAGAATTGCACTGCATGTTTGAAAGCATGGGAGGATATTATTGTAACATCAGAAAAAAATACAAGGGAATCAGAATCAGCAAATATTGGTGCTGATCTTTGTAGGTTTGCAGTACTAATCTCACTGACAAGCATTAAACTTTATGATAAACAATCAATTCATGCAGTTTATGAATGCCTTGGGGGGCAAAACCTTTCTGCAGATAAGCAAGAAATACAGACTAAGGGCAATGATAAAATCAGCTCAGGTCTCAGGATTCTAGTCTCTGTCTTAACCGGAGTCACAGTAATATTGCTTCTTGCTGCAATTTCATTGTTTATCAAAAGGATTAGAGGTGCTCCAAGACCAACAATACAAGATGAGTCCGAGGATTCGACATCGCTTAAGGTAACTTTGAAGGATGTTTATGGAGCAACTAACAATCTCAGCATGGAAAATTTCATAGGCCAAGGCGTAGCTGGAAAAGTGTACAAAGGGATACTATCCAATGGTGCTTATGTTGCAGTGAAGCATATCACAAATGAGGGTTACATGGAGACATTTGTGAGAGAAGTGAAAAGCCTTTCCCATGTTAGACATCCAAATCTAGTAGCTTTGCTTGGATACTGCGAAAAGGAAGCTGAATGCTTCCTAGTGTATGAACTATGCCACAATGGATGCCTCTCAGATTGGCTATTTGGCAATGATAAAAATCTTTCATGGATTCAAAGACTAGAGATTGCTGTTGATAGTGCAAGAGGCCTAGAGTTTCTCCACACCTACCCAGGTGGCCGCATTGTTCACCGTGATATAAAGCCATCAAATATTCTCATTGATGCCAAGTTCCAAGCAAAACTTTCAGACTTTGGGTTGTCCAAGGTTATGGATATGGGTCAATCCTATGTAAGCTCTGAAGTAAGAGGAACATTTGGCTACATTGATCCTGAATATAGGACAAACCACCATGTGAATACCTCAGGAGATGTCTACAGCTTTGGAATAGTATTGTTGCAACTTCTATCAGGACAAAGGGTCCTTGACATCAATTTCCAAAGACCAATGTCCCTAAGTAAAATGGCCAGATATTTTGCTAGATGTGGTGATATTTCAGAATTTGCTGACCCTAAACTCAAAGGGGAGTATTCTGTAGAAGCATTTGACATCACACTGAAGCTGGCTTTGTCATGCATAGGGCTCAAGGAGCAAAGACCCTCTATAGAGCAAGTTTTATATACCATAGAAAAGGCATTAGATATCTCAACATAA 4503 0.4504 MADSASSPAPTLEPKPQTSGSATPNPNPNQPDPPPTSTSLSPSPAPAPAAPNPNPNPLILSAPPPPPLSQHHHPTFSYTPPQVAAGAAFAPPAAPSFRVLPPQAPQFSTLPNHAAASVPPNLVYQNPSVPPPGVSSAGSMAPGVAAASGGVAVPASVPPMQPMMSYQVPPGQPAIPTLRPQYLPMPNGYAAVPGAPQGTVPPAGMPRFPPPYGAMVRPPVYPPRAPGAVNVLPVSRPVVAGVLAVRSIIPPVVRPVVAPSITPAEKPQTTVWVGKIAPTVENDFMLSILQICGPVKSWKRPQDLSNGTPKSFGFCEFETEEGVLRALRLLTKLNIDGQELMLNVDKNMKEHLERYVVKKTEDKKKEAQVAGAEKNDDSAQLADADGDGKSDAEHLNKDDKDSGNKDSPDFTTFGIVTDEDREADREASEKIANMIEERLKTRPVPAAPVQAAGDGSAMSSEQPEKRRDGDSDVGMGRNEAADDKNEKDTNSDVKPSSEHNRPETPDRRHDRKSRERDRDRELKREKERELERYEREAERERIRKEREQRRRIEDAERQYEACLKEWEYREREKEKERLYEKDKEKERERKRRKEILYDEEDEDDDSRKRWRRSALEEKRKKRLREKEDDMADRQKEEEEIAEAKKRAEEDQERQQQRDALKLLSDHHLVNGGEKAMASEEITNEVNYVVTEHSTAPDYSHEGHIGDANSLNTINDESANASVAETDTRSSANAPAKKLGFGLVGSGKRTTVPSVFHEDEDDDAHKDKKMRPLVPIDYSTEELQAVQPTASGPTPPNLAAAAEFAKRISSANLKEEKLDGERDRSKRSNEKSSHRDRDRNDEDGPHNRDEHKEKTDRGRDRDHGLEKPKTSDNKRLLDAKQLIDMIPKTKEELFSYEIDWAVYDKHDLHERMRPWISKKIKEFLGEEENTLIDYIVSSTQEHVKASQMLERLQIILDEEAEMFVLKMWRMLIFEIKKVETGLAQSSDCEQHNNWGGFISTCCGLYFDDYLSALGLHANQTGKVFLNSSEQEKCLSQKYFTGCGIEKLTSGNGGCSDYTVMDVINKFEDRLRRLDEDCMHLSINGRPNENCTACLKAWEDIIVTSEKNTRESESANIGADLCRFAVLISLTSIKLYDKQSIHAVYECLGGQNLSADKQEIQTKGNDKISSGLRILVSVLTGVTVILLLAAISLFIKRIRGAPRPTIQDESEDSTSLKVTLKDVYGATNNLSMENFIGQGVAGKVYKGILSNGAYVAVKHITNEGYMETFVREVKSLSHVRHPNLVALLGYCEKEAECFLVYELCHNGCLSDWLFGNDKNLSWIQRLEIAVDSARGLEFLHTYPGGRIVHRDIKPSNILIDAKFQAKLSDFGLSKVMDMGQSYVSSEVRGTFGYIDPEYRTNHHVNTSGDVYSFGIVLLQLLSGQRVLDINFQRPMSLSKMARYFARCGDISEFADPKLKGEYSVEAFDITLKLALSCIGLKEQRPSIEQVLYTIEKALDIST* 1501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0549 1500 MobiDBLite consensus disorder prediction 361 554 - -
Aev03g0549 1500 Pfam PWI domain 910 973 IPR002483 GO:0006397
Aev03g0549 1500 Coils Coil 1062 1082 - -
Aev03g0549 1500 MobiDBLite consensus disorder prediction 810 872 - -
Aev03g0549 1500 SUPERFAMILY Protein kinase-like (PK-like) 1211 1491 IPR011009 -
Aev03g0549 1500 Coils Coil 626 657 - -
Aev03g0549 1500 MobiDBLite consensus disorder prediction 1 25 - -
Aev03g0549 1500 MobiDBLite consensus disorder prediction 570 659 - -
Aev03g0549 1500 MobiDBLite consensus disorder prediction 717 796 - -
Aev03g0549 1500 SMART serkin_6 1228 1496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev03g0549 1500 MobiDBLite consensus disorder prediction 1 80 - -
Aev03g0549 1500 Gene3D - 261 379 IPR012677 -
Aev03g0549 1500 MobiDBLite consensus disorder prediction 752 774 - -
Aev03g0549 1500 Coils Coil 568 589 - -
Aev03g0549 1500 PANTHER SPLICING FACTOR PWI DOMAIN-CONTAINING PROTEIN / RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN 38 984 - -
Aev03g0549 1500 Pfam Protein kinase domain 1231 1488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev03g0549 1500 MobiDBLite consensus disorder prediction 460 554 - -
Aev03g0549 1500 SUPERFAMILY RNA-binding domain, RBD 256 350 IPR035979 GO:0003676
Aev03g0549 1500 MobiDBLite consensus disorder prediction 361 406 - -
Aev03g0549 1500 Coils Coil 516 565 - -
Aev03g0549 1500 CDD RRM_RBM25 269 352 IPR034268 -
Aev03g0549 1500 SUPERFAMILY PWI domain 908 975 IPR036483 GO:0006397
Aev03g0549 1500 SMART rrm1_1 270 343 IPR000504 GO:0003723
Aev03g0549 1500 Gene3D PWI domain 866 983 - -
Aev03g0549 1500 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 269 347 IPR000504 GO:0003723
Aev03g0549 1500 Gene3D Phosphorylase Kinase; domain 1 1194 1301 - -
Aev03g0549 1500 MobiDBLite consensus disorder prediction 26 71 - -
Aev03g0549 1500 ProSiteProfiles PWI domain profile. 890 987 IPR002483 GO:0006397
Aev03g0549 1500 ProSiteProfiles Protein kinase domain profile. 1228 1496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev03g0549 1500 Pfam SPARK 982 1111 IPR043891 -
Aev03g0549 1500 SMART pwi_2 903 976 IPR002483 GO:0006397
Aev03g0549 1500 MobiDBLite consensus disorder prediction 717 732 - -
Aev03g0549 1500 PANTHER SPLICING FACTOR PWI DOMAIN-CONTAINING PROTEIN / RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN 38 984 - -
Aev03g0549 1500 MobiDBLite consensus disorder prediction 415 437 - -
Aev03g0549 1500 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1345 1357 IPR008271 GO:0004672|GO:0006468
Aev03g0549 1500 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 271 340 IPR000504 GO:0003723
Aev03g0549 1500 Gene3D Transferase(Phosphotransferase) domain 1 1302 1499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0549 Aev-Chr3 4018545 4027637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0549 1214 1498 Receptor kinase-like Gene Family AT2G23200 38.699 9.26e-56 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Aev03g0549 Pkinase 2.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0549 K12822 - gmx:100809428 1038.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0549 03 4018545 4027637 Aev03g0549 03 4018545 4027637 ECH