Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0545 ATGGCTGCTTCTTCTTCTTCTTCAATGAGGATCTCAAGGCTTCTCTCTCGCTCTTTCTCTTCTGCAGCATCTTCTTTCTTCTCTCGAGGTGGGAAGGGTTACCTTGGTGCAAGACTGAGCAGATATAGCACTGCTGCTGCCATTGAAGAAGAACCAATTAAACCAGCAGTACAAGTAGAGCACACTCAACTCTTAATTGATGGAAAATTCGTTGATGCTCTTTCTGGTAAAACTTTTCCCACATTGGATCCCAGGACTGGGGAAGTGATAGCTCATGTTTCTGAGGGTCACTCTGAAGATGTTGATCGAGCAGTTGCAGCTGCAAGAAAAGCATTTGATCAAGGACCATGGCCCAAGATGACAGCCTATGAGAGGCAAAGGATATTGCTGCGTGCTGCTGATTTGCTTGAGAAGCACAATGATGAGCTTGCAGCACTTGAGACTTGGGATAATGGGAAGCCGTATGAACAATCGGCTCAGATTGAGATTCCAATGCTGGTTCGCCTGTTTAGGTACTATGCTGGTTGGGCAGATAAGATCCATGGTCTTACAGTTCCAGCTGATGGACCACATCACGTGCAAACATTGCATGAACCAATCGGTGTTGCCGGTCAGATCATTCCCTGGAACTTCCCTCTTCTCATGTTTGCTTGGAAGGTTGGACCAGCATTGGCCTGTGGCAACACAGTTGTTCTGAAAACAGCTGAGCAGACACCATTGTCTGCTTTATATGCAGCAAAACTATTTCATGAGGCTGGACTTCCTCCTGGTGTTTTGAATGTGGTATCGGGTTTTGGTCCAACTGCTGGTGCTGCTCTTGCTAGTCACATGGATGTGGATAAGCTTGCTTTTACCGGTTCAACCGATACCGGGAAAGTTGTCCTTGAACTATCGGCTAGAAGCAATCTTAAGCCTGTAACTTTGGAGCTTGGTGGGAAATCCCCATTTATTGTATGCGAAGATGCGGATGTAGATCAGGCCGTTGAGTTAGCACACTTTGCCTTATTCTTTAATCAGGGACAATGTTGCTGCGCTGGGTCTAGAACATATGTACATGAGCGTGTATATGACGAGTTTGTCGAGAAAGCCAAGGCTCGCGCTTTGAAACGTGTTGTTGGCGATCCATTCAAGGGGGGAATAGAGCAAGGTCCTCAGATTGATTCCGATCAATTTGAGAAAATTCTGAAGTACATCAGATCTGGTGTTCAAAGCGGAGCTACCCTCGAAACCGGAGGAGATAGACTTGGCAACAAGGGCTTCTATATTCAGCCTACTGTATTCTCAAATGTTCAGGATGGCATGCTGATTGCAAAGGAAGAGATATTTGGCCCAGTGCAATCCATTCTAAAATTCAAGGACCTTGGTGAGGTGATTCAGAGAGCAAACAACTCAAGATATGGGCTGGCAGCAGGGGTGTTCACAAAGAACATAGACACTGCAAACACACTGACAAGAGCTCTGAGAGTAGGAACAGTTTGGGTGAATTGCTTTGACATATTCGATGCAGCAATTCCATTTGGAGGGTACAAGATGAGTGGCCAAGGAAGAGAGAAAGGAGAGTACAGCCTCAAGAATTACTTGCAAGTTAAGGCTGTTGTTACTCCCTTGAAGAACCCTGCATGGCTTTAG 1629 0.4592 MAASSSSSMRISRLLSRSFSSAASSFFSRGGKGYLGARLSRYSTAAAIEEEPIKPAVQVEHTQLLIDGKFVDALSGKTFPTLDPRTGEVIAHVSEGHSEDVDRAVAAARKAFDQGPWPKMTAYERQRILLRAADLLEKHNDELAALETWDNGKPYEQSAQIEIPMLVRLFRYYAGWADKIHGLTVPADGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTVVLKTAEQTPLSALYAAKLFHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKVVLELSARSNLKPVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTYVHERVYDEFVEKAKARALKRVVGDPFKGGIEQGPQIDSDQFEKILKYIRSGVQSGATLETGGDRLGNKGFYIQPTVFSNVQDGMLIAKEEIFGPVQSILKFKDLGEVIQRANNSRYGLAAGVFTKNIDTANTLTRALRVGTVWVNCFDIFDAAIPFGGYKMSGQGREKGEYSLKNYLQVKAVVTPLKNPAWL* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0545 542 CDD ALDH_F2BC 59 534 - -
Aev03g0545 542 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 29 542 - -
Aev03g0545 542 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 76 532 IPR016162 GO:0016491
Aev03g0545 542 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 314 503 IPR016163 GO:0016620
Aev03g0545 542 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 29 542 - -
Aev03g0545 542 Pfam Aldehyde dehydrogenase family 72 532 IPR015590 GO:0016491
Aev03g0545 542 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 336 347 IPR016160 GO:0016491
Aev03g0545 542 SUPERFAMILY ALDH-like 57 536 IPR016161 GO:0016491
Aev03g0545 542 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 308 315 IPR029510 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0545 Aev-Chr3 3993153 3996956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0545 7 542 Aldehyde Dehydrogenase Gene Family AT3G48000 77.654 0.0 893
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0545 K00128 - gmx:100777399 980.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0545 03 3993153 3996956 Aev03g0545 03 3993153 3996956 ECH
Aev03g0545 03 3993153 3996956 Aev01g2030 01 24979085 24984393 ECH
Aev05g1285 05 9041696 9046161 Aev03g0545 03 3993153 3996956 PCT