Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0535 ATGTATTGGGTTCATTCTCAAATCTGCCATAGCAGTGATGCTGCAACCTATAACCCCACCATTATTTCCCTATCTTCTTCTTCTTCCTCTTCTTCATCATCATCTTCTTCTTCTCCTTCTTCTTCTTCCCCTTCATTGCCTCATCACAGTTCTGACTATAAGAAACAATTAGCACCACCACCACCACCTCTAGCTTCTTCATCTGGGAATAGATTAAGCCCTGCAGTTATTTTCATCATAGTCATTCTAGCTGTTGTGTTCTTAATCTCTGGTATCCTTCAATTGCTTGTTAGATTATTCATAAAGCACAGGTCCTCTGCTTCATCAATTTCCCAATCCAATAGGTTCCCTGAAATGTCCATTTCTGAATCTGATACCTACCAGAGACAGTTGCAGCAGCTGTTCCATCTTCATGATTCAGGCTTGGACCAGGCCTTCATAGATGCCCTCCCAGTTTTCTATTACAAGGAGATCATAGGATTGAAGGAGCCATTTGATTGTGCAGTTTGCCTCTGCCAATTCTCAGAACAAGACATGCTGAGGTTGCTGCCAATTTGCAACCATGCTTTTCACATTGACTGCATAGACACATGGCTCATGTCCAATTCAACTTGCCCTCTCTGTAGAGGGAGCCTCTATGATCCAGGGTTTGCATTTGAAAACCCTGTTTATGACTTTGAGGATCCAATGGAAGATGGGGTTTCTGGAACTGCTGAGGCTGTTTCTGTTAACAAACATGCAGAAAACCACATCATGAGTGGAAAAAGGGTGTTCTCTGTGAGGCTTGGGAAATTCAGAAGCTCAAATAATGGAGAGGGTTTAGAAAGGGGTGAAGGAGAGAGCAGTACTAGTACTAATACTGGTACTGCTACAAATAGTTTTGATGGAAGAAGGTGCTATTCAATGGGGTCTTTTCAGTATGTGGTTGCTGATTCAGATCTGCAAGTGGCTTTATGCCCTAATAGAGGTGATGCTACTAGTAGCAGTATGAGACAATTGTTGAAAGGGAGATTAGGTCAGTTTGGGAATTGTTCCACTGATGGGGATGTTGAGGGGAAGAAAATCAACATTGCTAGGAAAGGTGAAAGCTTTTCTGTTTCCAAGATCTGGCTATGGTCAAGGAAGGATAAGGTTTCAAGTTCACAAGAAACTCATTTTGGTAATTAA 1167 0.4199 MYWVHSQICHSSDAATYNPTIISLSSSSSSSSSSSSSSPSSSSPSLPHHSSDYKKQLAPPPPPLASSSGNRLSPAVIFIIVILAVVFLISGILQLLVRLFIKHRSSASSISQSNRFPEMSISESDTYQRQLQQLFHLHDSGLDQAFIDALPVFYYKEIIGLKEPFDCAVCLCQFSEQDMLRLLPICNHAFHIDCIDTWLMSNSTCPLCRGSLYDPGFAFENPVYDFEDPMEDGVSGTAEAVSVNKHAENHIMSGKRVFSVRLGKFRSSNNGEGLERGEGESSTSTNTGTATNSFDGRRCYSMGSFQYVVADSDLQVALCPNRGDATSSSMRQLLKGRLGQFGNCSTDGDVEGKKINIARKGESFSVSKIWLWSRKDKVSSSQETHFGN* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0535 388 SMART ring_2 167 208 IPR001841 -
Aev03g0535 388 MobiDBLite consensus disorder prediction 269 290 - -
Aev03g0535 388 ProSiteProfiles Zinc finger RING-type profile. 167 209 IPR001841 -
Aev03g0535 388 CDD RING-H2_PA-TM-RING 166 209 - -
Aev03g0535 388 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 386 - -
Aev03g0535 388 MobiDBLite consensus disorder prediction 25 50 - -
Aev03g0535 388 MobiDBLite consensus disorder prediction 25 66 - -
Aev03g0535 388 Pfam Ring finger domain 166 209 IPR001841 -
Aev03g0535 388 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 111 214 IPR013083 -
Aev03g0535 388 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 1 386 - -
Aev03g0535 388 SUPERFAMILY RING/U-box 146 215 - -
Aev03g0535 388 MobiDBLite consensus disorder prediction 274 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0535 Aev-Chr3 3911716 3912882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0535 91 377 C3H Transcription Factor Family AT2G18650 37.618 3.77e-56 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0535 - - gmx:100818135 480.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1294 05 9149659 9150801 Aev03g0535 03 3911716 3912882 PCT