Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0518 ATGAATGAGGAGCCACCGCCGGCGATCCTCATGCCTCTCTCCTGCAGCTCCGACTGCGACCTCCTCTGTGGCGAGGACACCTCCGGAATCCTGTCCGGAGAGTCGCCGGAATGCTCCTCCGACCTTGATTCCTCCCAAACCTCATCGTCGTCGTCGTTTTCGTCGGAGGATGAATCCATCGCCGGATTCATCGAGCACGAGCGCAACTTTGTGCCGGGATTCGATTACCTCTCGAGGTTCGAATCTCGCTCCCTCGACGCCAACGCCAGAGAAGAATCCGTTGCATGGATTCTCAAGGTTCACGCATATTACGGGTTTCAGCCGCTGACGGCGTACCTTGCCGTCAATTATATGGATCGGTTTTTGGATTCTCGCCGGTTGCCGCAAACAAATGGGTGGCCTCTGCAGCTTCTATCGGTTGCTTGTTTGTCTATAGCGGCAAAGATGGAGGAACCTCTCGTTCCTTCTCTCTTGGACCTTCAGGTGGAAGGAGCTAAATATGTATTTGAGCCGCGAACGATTCGAAGGATGGAGCTACTTGTTCTGGGTGTCCTGGATTGGAGGCTAAGATCAGTGACCCCACTTAGCTTCCTCTCTTTCTTTGCGTGCAAGATACATTCATCTGGAACTTCTACTTTTACTGGGTTCCTCATTTCACGGGCTACAGAAATCATCTTATCTAATATCCAAGAGGCTAGCTTTCTTGCTTACAAGCCGTCATGCATTGCTGCTGCTGCAATACTCTGTGCAGCTAATGAAATTCCTAATTGGTCTCTCGTTACGCCTGAGCATGCTGAGTCATGGTGTGACGGACTAAGAAAAGAAAAAATCATAGGGTGCTACAAGTTGATGCAAGAGCTTGAGATTAGCAACAACCGGAGGAAGCCCCCAAAAGTTTTGGCACAGATGCGAGTTACAACCCGGACCCGAATAAGGTCAAGTGTCCCACCACCATTATCATCAATATTCCCATCGTCGTCGTCTTCTTCTTCTTCATCCTCTTTCTCGTTGTCTCTGTCTCATAAAAGGAGGAAATTAAGTAACTGCTTGTGGGTGGATGGTGATGACGATGACAAAGGAAACTCCGAGTGA 1092 0.4973 MNEEPPPAILMPLSCSSDCDLLCGEDTSGILSGESPECSSDLDSSQTSSSSSFSSEDESIAGFIEHERNFVPGFDYLSRFESRSLDANAREESVAWILKVHAYYGFQPLTAYLAVNYMDRFLDSRRLPQTNGWPLQLLSVACLSIAAKMEEPLVPSLLDLQVEGAKYVFEPRTIRRMELLVLGVLDWRLRSVTPLSFLSFFACKIHSSGTSTFTGFLISRATEIILSNIQEASFLAYKPSCIAAAAILCAANEIPNWSLVTPEHAESWCDGLRKEKIIGCYKLMQELEISNNRRKPPKVLAQMRVTTRTRIRSSVPPPLSSIFPSSSSSSSSSSFSLSLSHKRRKLSNCLWVDGDDDDKGNSE* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0518 363 MobiDBLite consensus disorder prediction 312 342 - -
Aev03g0518 363 SUPERFAMILY Cyclin-like 57 189 IPR036915 -
Aev03g0518 363 PANTHER CYCLINS 23 332 IPR039361 -
Aev03g0518 363 Gene3D - 64 256 - -
Aev03g0518 363 ProSitePatterns Cyclins signature. 90 121 IPR006671 -
Aev03g0518 363 Gene3D - 73 190 - -
Aev03g0518 363 Pfam Cyclin, N-terminal domain 62 189 IPR006671 -
Aev03g0518 363 CDD CYCLIN 96 182 IPR013763 -
Aev03g0518 363 SUPERFAMILY Cyclin-like 174 293 IPR036915 -
Aev03g0518 363 Pfam Cyclin, C-terminal domain 192 311 IPR004367 -
Aev03g0518 363 SMART cyclin_7 95 183 IPR013763 -
Aev03g0518 363 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 23 332 - -
Aev03g0518 363 SMART Cyclin_C_2 192 319 IPR004367 -
Aev03g0518 363 MobiDBLite consensus disorder prediction 33 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0518 Aev-Chr3 3794863 3798428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0518 11 361 Core Cell Cycle Gene Families AT1G70210 61.756 7.41e-138 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0518 K18810 - gmx:100818190 509.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0518 03 3794863 3798428 Aev03g0518 03 3794863 3798428 ECH
Aev05g1522 05 11545711 11554460 Aev03g0518 03 3794863 3798428 PCT