Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev03g0512 | ATGATTCTTACTCGTTCTGCTTTGTTGATCCATCTCCACAATCCCCCAATTCCACACCAATTCTTCAACCATGCTCCTACCTTTCTCCGAGGCTCCACTTCTTCATCTTCTCTCTTCAAAGCTCGCTTCTTTTCTCTCACCCATCCACGCCCAACGCGAACAACAACACCCTTTGGGGCCCGTGTTGCAGCATCGCTAGCGGAAGATTCAAAGGGCAGAGACACTTTCTTTGCAGAAGAAAATGTTTCGTGGAGCTCACTCGGTCTCTCTGATACCCTTTCTCGAGCTCTCTCTAACATTGGCCTCAACAGACCCTCTTTCGTTCAGGCTTCTTCTGTACCGTCTGTGCTATCTGGAAAGGATGTGATTATTGCGGCTGAGACGGGCAGTGGTAAAACATACAGTTACTTAGTTCCTCTAATTGATAAGCTTAGGGACACCAAGGAGCAATCTCTAACTACTGTGTCTGATCAAGATGTGTCCCCGCCGCAAAAGGTTCTGCTTGTTCTTTGTCTGAATGTACAACTGTGTGAACAGGTAGTTAGGATGGCTAACAGTCTCTGCAGAGACAATGGTGACCCGATTGTTAGTGTGGCAGCAGTTTGTGGCAGACAGGGATGGCCAATTCGTGAGCCTGATATCATTGTGACCACACCTGCTGCTCTTCTGAATTATATCGACCCGGATAGAACTCGCCGCATTGAATTTATGCGAGGTGTTAAATATGTGGTGTTTGATGAGGCTGATATGCTTCTCTGTGGTAGTTTTCAGAATAAAGTGATACGCCTGATAAATTTGCTTCGCTTTGATGAAAAGCTTTTGTCTCGAGCAAAAGAATCTGTAAGAGAGTTGCCAGAGAAACCAGAATCTTCCTTGTCATCACATGATGATTTGGAAGGTGAAGAGGAACTTCATACTGAAGCCAATTCAGAAGAGGGTGACGATACTCATCAGGATACTGTTGATATTAATAATGAAGCTGAATCCACAAAGCAACGTGACTGGAGGAGAGTGAGGAAAATTTATGACCGCACAAAACAGTATATTTTTGTTGCAGCTACACTACCAGTGAATGGAAAGAAAACAGCTGGAGCAATATTGAAACACATGTTTCCTGGTTCTCGGTGGGTTAGTGGAAACTATCTTCATTGTCATAACCCAAGATTGGAGCAAAGATGGATCGAAGTTACGGTTGATACACAGGTGGATGAACTCATAAAGGCTGTGAATCATGGTTTCAGGCCAGTAGATTTGGATAATGCTGGTGGCATTCGCAGAACAATGGTGTTTGCTAACACTGTTGAGGCTGTCGAAGCTGTGGCCAAGATATTGCTCCAATCTGGGATTGAATGTTTACGTTATCATAAGAATTGTACATTGGAGGAGCGAGCACAGACCTTAGTTGAATTCCAAGAAAAAGGCGGCGTTCTTGTATGTACTGATGCAGCTGCTCGTGGTGTTGATATTCCAAATGTCTTACATGTTATTCAGGCAGACTTCGCTACTTCTGCTGTAGACTTTTTGCATAGGGTTGGTCGTACAGCTAGAGCTGGTCAATTTGGACTTGTTACCAGCATGTACACTGAATCCAACAGGGAGCTTGTCAATGCAGTTCGTCGAGCTGGAGATCTTGATCAACCTGTGGAGACTGCATTTAGCAGGAAAAGAAGCTTCCGAAACAAGCTCAAAAAGAGGGGTGCTAACAAAGTCAGAGATTCAGAGACCTTTAAAGAGAGTGTTGTAGCATGA | 1749 | 0.4437 | MILTRSALLIHLHNPPIPHQFFNHAPTFLRGSTSSSSLFKARFFSLTHPRPTRTTTPFGARVAASLAEDSKGRDTFFAEENVSWSSLGLSDTLSRALSNIGLNRPSFVQASSVPSVLSGKDVIIAAETGSGKTYSYLVPLIDKLRDTKEQSLTTVSDQDVSPPQKVLLVLCLNVQLCEQVVRMANSLCRDNGDPIVSVAAVCGRQGWPIREPDIIVTTPAALLNYIDPDRTRRIEFMRGVKYVVFDEADMLLCGSFQNKVIRLINLLRFDEKLLSRAKESVRELPEKPESSLSSHDDLEGEEELHTEANSEEGDDTHQDTVDINNEAESTKQRDWRRVRKIYDRTKQYIFVAATLPVNGKKTAGAILKHMFPGSRWVSGNYLHCHNPRLEQRWIEVTVDTQVDELIKAVNHGFRPVDLDNAGGIRRTMVFANTVEAVEAVAKILLQSGIECLRYHKNCTLEERAQTLVEFQEKGGVLVCTDAAARGVDIPNVLHVIQADFATSAVDFLHRVGRTARAGQFGLVTSMYTESNRELVNAVRRAGDLDQPVETAFSRKRSFRNKLKKRGANKVRDSETFKESVVA* | 583 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev03g0512 | 582 | CDD | DEADc | 93 | 287 | - | - | |
Aev03g0512 | 582 | CDD | SF2_C_DEAD | 389 | 527 | - | - | |
Aev03g0512 | 582 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 82 | 110 | IPR014014 | GO:0003724 | |
Aev03g0512 | 582 | PANTHER | ATP-DEPENDENT RNA HELICASE DBP3 | 59 | 554 | - | - | |
Aev03g0512 | 582 | Gene3D | - | 394 | 582 | IPR027417 | - | |
Aev03g0512 | 582 | MobiDBLite | consensus disorder prediction | 280 | 302 | - | - | |
Aev03g0512 | 582 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 401 | 566 | IPR001650 | - | |
Aev03g0512 | 582 | MobiDBLite | consensus disorder prediction | 310 | 331 | - | - | |
Aev03g0512 | 582 | MobiDBLite | consensus disorder prediction | 280 | 331 | - | - | |
Aev03g0512 | 582 | Gene3D | - | 62 | 371 | IPR027417 | - | |
Aev03g0512 | 582 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 113 | 373 | IPR014001 | - | |
Aev03g0512 | 582 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 114 | 530 | IPR027417 | - | |
Aev03g0512 | 582 | SMART | helicmild6 | 438 | 518 | IPR001650 | - | |
Aev03g0512 | 582 | Pfam | Helicase conserved C-terminal domain | 425 | 518 | IPR001650 | - | |
Aev03g0512 | 582 | PANTHER | DEAD-BOX ATP-DEPENDENT RNA HELICASE 22 | 59 | 554 | - | - | |
Aev03g0512 | 582 | Pfam | DEAD/DEAH box helicase | 108 | 271 | IPR011545 | GO:0003676|GO:0005524 | |
Aev03g0512 | 582 | SMART | ultradead3 | 101 | 392 | IPR014001 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev03g0512 | Aev-Chr3 | 3740400 | 3744965 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aev03g0512 | 417 | 535 | Eukaryotic Initiation Factors Gene Family | AT3G13920 | 27.500 | 3.08e-07 | 51.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev03g0512 | - | - | gmx:100780518 | 890.952 |