Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0512 ATGATTCTTACTCGTTCTGCTTTGTTGATCCATCTCCACAATCCCCCAATTCCACACCAATTCTTCAACCATGCTCCTACCTTTCTCCGAGGCTCCACTTCTTCATCTTCTCTCTTCAAAGCTCGCTTCTTTTCTCTCACCCATCCACGCCCAACGCGAACAACAACACCCTTTGGGGCCCGTGTTGCAGCATCGCTAGCGGAAGATTCAAAGGGCAGAGACACTTTCTTTGCAGAAGAAAATGTTTCGTGGAGCTCACTCGGTCTCTCTGATACCCTTTCTCGAGCTCTCTCTAACATTGGCCTCAACAGACCCTCTTTCGTTCAGGCTTCTTCTGTACCGTCTGTGCTATCTGGAAAGGATGTGATTATTGCGGCTGAGACGGGCAGTGGTAAAACATACAGTTACTTAGTTCCTCTAATTGATAAGCTTAGGGACACCAAGGAGCAATCTCTAACTACTGTGTCTGATCAAGATGTGTCCCCGCCGCAAAAGGTTCTGCTTGTTCTTTGTCTGAATGTACAACTGTGTGAACAGGTAGTTAGGATGGCTAACAGTCTCTGCAGAGACAATGGTGACCCGATTGTTAGTGTGGCAGCAGTTTGTGGCAGACAGGGATGGCCAATTCGTGAGCCTGATATCATTGTGACCACACCTGCTGCTCTTCTGAATTATATCGACCCGGATAGAACTCGCCGCATTGAATTTATGCGAGGTGTTAAATATGTGGTGTTTGATGAGGCTGATATGCTTCTCTGTGGTAGTTTTCAGAATAAAGTGATACGCCTGATAAATTTGCTTCGCTTTGATGAAAAGCTTTTGTCTCGAGCAAAAGAATCTGTAAGAGAGTTGCCAGAGAAACCAGAATCTTCCTTGTCATCACATGATGATTTGGAAGGTGAAGAGGAACTTCATACTGAAGCCAATTCAGAAGAGGGTGACGATACTCATCAGGATACTGTTGATATTAATAATGAAGCTGAATCCACAAAGCAACGTGACTGGAGGAGAGTGAGGAAAATTTATGACCGCACAAAACAGTATATTTTTGTTGCAGCTACACTACCAGTGAATGGAAAGAAAACAGCTGGAGCAATATTGAAACACATGTTTCCTGGTTCTCGGTGGGTTAGTGGAAACTATCTTCATTGTCATAACCCAAGATTGGAGCAAAGATGGATCGAAGTTACGGTTGATACACAGGTGGATGAACTCATAAAGGCTGTGAATCATGGTTTCAGGCCAGTAGATTTGGATAATGCTGGTGGCATTCGCAGAACAATGGTGTTTGCTAACACTGTTGAGGCTGTCGAAGCTGTGGCCAAGATATTGCTCCAATCTGGGATTGAATGTTTACGTTATCATAAGAATTGTACATTGGAGGAGCGAGCACAGACCTTAGTTGAATTCCAAGAAAAAGGCGGCGTTCTTGTATGTACTGATGCAGCTGCTCGTGGTGTTGATATTCCAAATGTCTTACATGTTATTCAGGCAGACTTCGCTACTTCTGCTGTAGACTTTTTGCATAGGGTTGGTCGTACAGCTAGAGCTGGTCAATTTGGACTTGTTACCAGCATGTACACTGAATCCAACAGGGAGCTTGTCAATGCAGTTCGTCGAGCTGGAGATCTTGATCAACCTGTGGAGACTGCATTTAGCAGGAAAAGAAGCTTCCGAAACAAGCTCAAAAAGAGGGGTGCTAACAAAGTCAGAGATTCAGAGACCTTTAAAGAGAGTGTTGTAGCATGA 1749 0.4437 MILTRSALLIHLHNPPIPHQFFNHAPTFLRGSTSSSSLFKARFFSLTHPRPTRTTTPFGARVAASLAEDSKGRDTFFAEENVSWSSLGLSDTLSRALSNIGLNRPSFVQASSVPSVLSGKDVIIAAETGSGKTYSYLVPLIDKLRDTKEQSLTTVSDQDVSPPQKVLLVLCLNVQLCEQVVRMANSLCRDNGDPIVSVAAVCGRQGWPIREPDIIVTTPAALLNYIDPDRTRRIEFMRGVKYVVFDEADMLLCGSFQNKVIRLINLLRFDEKLLSRAKESVRELPEKPESSLSSHDDLEGEEELHTEANSEEGDDTHQDTVDINNEAESTKQRDWRRVRKIYDRTKQYIFVAATLPVNGKKTAGAILKHMFPGSRWVSGNYLHCHNPRLEQRWIEVTVDTQVDELIKAVNHGFRPVDLDNAGGIRRTMVFANTVEAVEAVAKILLQSGIECLRYHKNCTLEERAQTLVEFQEKGGVLVCTDAAARGVDIPNVLHVIQADFATSAVDFLHRVGRTARAGQFGLVTSMYTESNRELVNAVRRAGDLDQPVETAFSRKRSFRNKLKKRGANKVRDSETFKESVVA* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0512 582 CDD DEADc 93 287 - -
Aev03g0512 582 CDD SF2_C_DEAD 389 527 - -
Aev03g0512 582 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 82 110 IPR014014 GO:0003724
Aev03g0512 582 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 59 554 - -
Aev03g0512 582 Gene3D - 394 582 IPR027417 -
Aev03g0512 582 MobiDBLite consensus disorder prediction 280 302 - -
Aev03g0512 582 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 401 566 IPR001650 -
Aev03g0512 582 MobiDBLite consensus disorder prediction 310 331 - -
Aev03g0512 582 MobiDBLite consensus disorder prediction 280 331 - -
Aev03g0512 582 Gene3D - 62 371 IPR027417 -
Aev03g0512 582 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 113 373 IPR014001 -
Aev03g0512 582 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 114 530 IPR027417 -
Aev03g0512 582 SMART helicmild6 438 518 IPR001650 -
Aev03g0512 582 Pfam Helicase conserved C-terminal domain 425 518 IPR001650 -
Aev03g0512 582 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 22 59 554 - -
Aev03g0512 582 Pfam DEAD/DEAH box helicase 108 271 IPR011545 GO:0003676|GO:0005524
Aev03g0512 582 SMART ultradead3 101 392 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0512 Aev-Chr3 3740400 3744965 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0512 417 535 Eukaryotic Initiation Factors Gene Family AT3G13920 27.500 3.08e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0512 - - gmx:100780518 890.952