Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0503 ATGGCGATGAGAAGAAGAAATGGTCCTAAACTGAAGATGGAAGATGCCATAGCATTCATGAATTTAGTAAAGGTTACACTATCTCGAGACCACACGCAAAAGTACCAACAATTCGTGAAGGTCATGAAAGATTTCAAGGCTCGTAGAATTGATGTCTTGCGTGTGAGAGATAGGGTGGAGAAGATTTTTTCAGAACATTGGAATCTATATTTTGGATTCGACGCATTCTTGCCACAGGGATACAAATTCTTCATTGATAAAAATTCTCGGGATTCTGCTGAATTCAGAATTGGTATCGACTTTGAATTAAAGATTCTGAGACAGTTTAAAGACGGAAATAGTGTTTATAATTCATGTGTTTATAATTCATTTCGGGATGTTCTTGATCTGTGCAAGGGAAGAAACACAGATATGAAGCACGTGCGCAACGAGGATTTGGCTATCAGGGTGAAGGCAAGAATGGCAAGAGAAGGTGGTTTGAAGAGACTAACTACGGATGATGCCTTGCAATATGTGAAGGCAGTGAGAGATGCATTTCATGATAAGAAGGAGATTTATGATCGCTTTTTGCATACCATGAAAGAGTACAAAGATAAAAGAATTGATACCGAAGGTGTTGTGGCAATAGTGAAGGAGCTGTTTGAAGGGCATAGTGATCTACTTATGGGATTTAACACCTTTGTGCCCAATGGATATGAAATCAACCTTCCATTGGAGAATCAACAACAACAACAACCTCAACCTCCTAAGAGGATCTCTGAACTAGCTTCAAGTTTTGTCAACAAGGTTAAGGATCGGTTCGGAGACGATTATATTACTTACAAGTGCTTCCTGAACATAATGAACAAGCTGGGTGAGGGAAAAAAGACTCTCGACGAGGCTTACCATGAGGATTATTCGCTTGACTCTTTGTTGAGGAGGGTGATCTGTCTGCAATTTGGGGCTCTGGAATTGTTGCTCGAGTTTGATGACTCTGTGGATTTCCCTCTGATGAAGAGGTCCAGAGATGATGCTTACATGAGTTCTCAACTCAAACGACCCATGATATCTTCGAGAGGGGAAAGCTCGGCGCAACCCCAGGTGATGACAGGTGGTGGTGGCGGTGGTGGAGGCGGTGGTCAAAAACTGACCACAAACGATGCCTTACAATATCTCAAGGCCGTGAAGGATATGTTTCACGATAATAAGGAAAAATATGATGACTTTTTGGAAGTCATGAAGGATTTCAAAGCTCAAAGAGTTGATACTGCGGGTGTCATAGCTAGAGTGAAGGAGCTGTTTAAAGGGCATAGAAATCTAATTTTGGGGTTTAACACCTTCTTGCCAAAGGGATATGAAATCACACTTCCATCGGAGGATGAACAACCTCAGCAGAAGAAGCCTGTTGAATTTGCACAAGCTATAAATTTCGTAGGCAAGATTAAGACTCGGTTTCAAGGCGATGACCGTGTTTACAAGTCATTTCTTGATATACTGAATATGTACAGAAAGGAAACCAAGTCTATCTCTGAGGTTTACCAGGAGGTTGCTGAACTTTTCCAGGACCATGAAGATCTTCTCGAGGAGTTTACTCATTTTCTTCCTGATCCTTCAGTACCAGCTTCTACTCATCATGCTTCTGGTCGGAATTCTATGCTTCGTGATAGGAGCTCTGCAATGCCAACTTCGAGGCCGGTGCTTGTTGACAAGAGAGAAAAGACCATGGCTTCGCATGGTGATCGTGACCTCAGTGTTGACCGTCCTGATGATAAGGAGCAGAGGAGACGTATTGAGAAGGAAAGGGACCGCCGAGAAGAGAGAGATAGGCGAGAACGGGAAAGGGATGATAGAGATTATGACTATGATGGTAGTCGGGACCGGTTATCCCACAAGCGGAAATCTGGTCGTAGGGCTGAAGACTCTGGTGCTGAACCATTGCATGATGCAGATGATAATTTTGGATTGCACCCTATGTCATCCACTTGTGAGGATAAAAGTTCTTTGAAAAGTATGTGCAGTCAAGTAGTTGCTTTCCTTGAGAAAGTCAAGGAGAAATTACGTACTCCTGAGGATTACCAGGAATTTTTGAAGTGTCTACATATCTACAGCAGGGAAATAATTACCCGACAAGAATTGCAGTCATTGGTGGGTGATTTACTGGGAAAATATCCAGATCTTATGGAGGGATTTAACGATTTTTTGGTACAATGTGAGAAGAATGAGGGATTTCTTGCTGGCGTCATGAATAAAAAGTCTTTGTGGAGTGAAGGACATGGATCAAAACCAATGAAGGTAGAGGACAGAGACAGAGATCGAGAGCGTAATAGAGATGAAGGGGTGAAAGAAAGGGATCGTGAATTGCGAGAAAGGGACAAATCCACTGCAATTCCCAACAGAGATGCGTTAGCTCCTAGGATGTCTCTATATGCCAGCAAGGATAAATATTTAACAAAACCTATAAATGAGCTGGACCTTTCTAACTGTGAACGATGTACTCCCAGCTACCGACTTCTTCCAAACGATTACCCAATACCAACAGCAAGCCAGAGAACAGAACTTGGTGCAGAAGTATTAAATGATCACTGGGTTTCTGTCACTTCAGGAAGTGAAGATTATTCCTTTAAACACATGCGCAAAAATCAGTACGAAGAGAGTTTATTCAGATGTGAAGATGACAGGTATGAACTTGATATGTTGTTAGAGTCTGTAAATGCTGCAAGCAAGCGAGTTGAAGACCTCTTAGAAAAGATTAATACTAATGTTATTAAAGGCGACAGTCCAATTCGTATTGAGGAACACTTGACAGTTTTAAATCTTAGATTGATTGAACGATTATATGGTGACCATGGGCTTGATGCGATGGATGGACTAAGGAAGAATGCATCTCGAGCTTTGCCAGTCATATTAAACCGCTTGAAGCAGAAATATGAAGAGTGGGCAAGGTTTCGTGTTGATTGTACCCCATATTGGGGTAAAGTGTACGCTATGAACTATCATAAATCACTTGATCACCGTAGCTTCTACTTTAAGCAAAATGATAGTAAAAGCTTGAGTTCTAAAGCCTTACTGGCAGAGATCAAAGAAATTAGTGAGAAGAAATGGAAAGAAGATGATGTTCTTCTTGCAATTGCTGCTGGAAATAGACGCCCTATTCTTCCTCACTTAGAGTTTGGATATCCTGATCCGCAGATTCTTGAAGATTTGTATCAGTTAATAAAATACTCCTGTGGTGAACTTTGTACAACTGAACAGCTGGATAAAGTTATGAGGATTTGGACAACATTTTTAGAACCCATGCTAGGTGTTCCTGCTCGTCCCCAGGGTCCTGAGGATACAGAAGATGTTGTCAACACTACGAATAATCCTGCCAAAAGTGGCACTGCAAATGTTGCTAATGTTGATGATTGTCCTAGTGTTGTTGCCACTTCTAAGAATTTAAACGCTAACAGAACTGGGGAAGAGAGTATTCCATTAGAGCAATCAAATTCTTCCAAAGAATGGAAAACAAATGGGGATAGTGGGGTTAAAGAGGATAATTGTCTTGATCCAGAGCGCACTGCTCATAAGACTGAAACTTTGGGCATTAGTACACAGCAGGGTAAAATGCATATGAGTGCATCCATAACTGATGAAGTATCAAGAGTCAATAAACAAGAGCATTCCACTGAACCTTTGGTGAATGCTGATGTTTCACTGGTCTCTGGAATGGAACAAAGTAATGGAAGAACTAATGTAGATAATGCATCAGGACTTGTTGCAACTTCATCTAGACCTGGAAATGTTTCTGGCGAGGGAGGGCTTGATTTACCTCCATCAGAGGGTGCTGATTCTACAAGGCTTGTTACATCCTCGAATGGGGTCATCGCTGATGGCACCAAAGTTCACAGATACCCAGAAGAATCAGTTGGGCAACTCAAAAGTGAAAGAGAAGAGGGTGAGTTATCTCCTAATGGAGACTTTGAAGAGGATAACTTTGCAGTTTATGGAGATGCTGGTTTGGAGGCAGATATTAAAGGGAAGGACGGTGGTGCAAGCCAACAATACCAGAATAGGCATGGGGAAGAAGTTTGTGGTGAAGCTGGAGGGGAAAATGATGCTGATGAAGGTGAAGAAAGTCCTCATAGGTCATCTCAAGACAGTGACAATGCTTCAGAAAATGATATTTCTGGAAGTGAGTCTGTTGAAGAGCATGAGGAGGACGGGGATCATGAACATGATAACAAGGCTGAGAGTGAAGGTGAAGCTGAAGGGATGGCTGATGCCAATGATGTTGAAGGAGATGGTGCTTCATTGTCATTTTCAGAACGCTTTCTTCGCACTGTAAAGCCACTGGCAAAACATGTTCTGCCAGTGTTGCATGAGAATGAAAATAATGGTCTAGTTTTTTATGGAAATGATTCCTTCTATGTCCTGTTTAGACTTCATCAGATATTGTATGAGAGAATTCACTCAGCGAAGATTAATTCATCTTCTGCTGAAAGGAAGTGGAAGGCTTCAAATGATACTGGATCTAGCGATCAGTATGGCAGGTTCATGAATTCCCTTTACAATTTACTGGATGGTTCTTATGATAATGCAAAATTTGAGGATGATTGTCGAGCTATAATTGGAACTCAATCATATGTTCTATTCACATTAGACAGGCTGATATATAAACTTGTTAAACAGCTTCAAGCTGTTGCTGCTGATGAGATGGCTGGCAAGCTTCTTCAACTATATGCATATGAGAAATCAAGAAAACCTGGAAGATTTGTCGATTCAGTTTATCATGATAATGCTCGTGTTCTTATTCCTGATGAGAATATATATCGAATTCAATGTTCACCTGCTCCTACACATTTGTCTATTCAACTGATGGACTATGGACATGATAAGCCTGAAGTGACTGCTGTGTCAATGGACCCAAATTTTTCCACCTATCTGTTTGATGATTTCCTATCTGTTGTCCCTGACCAAGATGAGATTTCAGGAATTTTCTTGAAGAGGAATAAACGCAAATATGCCTTTACTGATGAATTTCCTAGCCAAGCCATGGATGGATTCCAAGTTACCAATGGTCTGGAGTGCAAGATAGCTTGCAGTTCTTCTAAGGTTTCATACGTTTTAGATACTGAAGACTTTTTAGTACGAACACAAAGGAAAAGGAGAACCTCGCATCAGAGCAAATCGTGCCATGAAATGGCTGAGTCTTCAAATATCTCTTCGGTCAGAGCTCAACGCATTTTTGGTCATGCATCATCGGCGGCGGCGCGAGACAGATATGACATCCCATGGTTGGAGCTGAGCAAAGGATGTTCTTTTTGGCTTTCTGATATTTAA 5298 0.4134 MAMRRRNGPKLKMEDAIAFMNLVKVTLSRDHTQKYQQFVKVMKDFKARRIDVLRVRDRVEKIFSEHWNLYFGFDAFLPQGYKFFIDKNSRDSAEFRIGIDFELKILRQFKDGNSVYNSCVYNSFRDVLDLCKGRNTDMKHVRNEDLAIRVKARMAREGGLKRLTTDDALQYVKAVRDAFHDKKEIYDRFLHTMKEYKDKRIDTEGVVAIVKELFEGHSDLLMGFNTFVPNGYEINLPLENQQQQQPQPPKRISELASSFVNKVKDRFGDDYITYKCFLNIMNKLGEGKKTLDEAYHEDYSLDSLLRRVICLQFGALELLLEFDDSVDFPLMKRSRDDAYMSSQLKRPMISSRGESSAQPQVMTGGGGGGGGGGQKLTTNDALQYLKAVKDMFHDNKEKYDDFLEVMKDFKAQRVDTAGVIARVKELFKGHRNLILGFNTFLPKGYEITLPSEDEQPQQKKPVEFAQAINFVGKIKTRFQGDDRVYKSFLDILNMYRKETKSISEVYQEVAELFQDHEDLLEEFTHFLPDPSVPASTHHASGRNSMLRDRSSAMPTSRPVLVDKREKTMASHGDRDLSVDRPDDKEQRRRIEKERDRREERDRRERERDDRDYDYDGSRDRLSHKRKSGRRAEDSGAEPLHDADDNFGLHPMSSTCEDKSSLKSMCSQVVAFLEKVKEKLRTPEDYQEFLKCLHIYSREIITRQELQSLVGDLLGKYPDLMEGFNDFLVQCEKNEGFLAGVMNKKSLWSEGHGSKPMKVEDRDRDRERNRDEGVKERDRELRERDKSTAIPNRDALAPRMSLYASKDKYLTKPINELDLSNCERCTPSYRLLPNDYPIPTASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRYELDMLLESVNAASKRVEDLLEKINTNVIKGDSPIRIEEHLTVLNLRLIERLYGDHGLDAMDGLRKNASRALPVILNRLKQKYEEWARFRVDCTPYWGKVYAMNYHKSLDHRSFYFKQNDSKSLSSKALLAEIKEISEKKWKEDDVLLAIAAGNRRPILPHLEFGYPDPQILEDLYQLIKYSCGELCTTEQLDKVMRIWTTFLEPMLGVPARPQGPEDTEDVVNTTNNPAKSGTANVANVDDCPSVVATSKNLNANRTGEESIPLEQSNSSKEWKTNGDSGVKEDNCLDPERTAHKTETLGISTQQGKMHMSASITDEVSRVNKQEHSTEPLVNADVSLVSGMEQSNGRTNVDNASGLVATSSRPGNVSGEGGLDLPPSEGADSTRLVTSSNGVIADGTKVHRYPEESVGQLKSEREEGELSPNGDFEEDNFAVYGDAGLEADIKGKDGGASQQYQNRHGEEVCGEAGGENDADEGEESPHRSSQDSDNASENDISGSESVEEHEEDGDHEHDNKAESEGEAEGMADANDVEGDGASLSFSERFLRTVKPLAKHVLPVLHENENNGLVFYGNDSFYVLFRLHQILYERIHSAKINSSSAERKWKASNDTGSSDQYGRFMNSLYNLLDGSYDNAKFEDDCRAIIGTQSYVLFTLDRLIYKLVKQLQAVAADEMAGKLLQLYAYEKSRKPGRFVDSVYHDNARVLIPDENIYRIQCSPAPTHLSIQLMDYGHDKPEVTAVSMDPNFSTYLFDDFLSVVPDQDEISGIFLKRNKRKYAFTDEFPSQAMDGFQVTNGLECKIACSSSKVSYVLDTEDFLVRTQRKRRTSHQSKSCHEMAESSNISSVRAQRIFGHASSAAARDRYDIPWLELSKGCSFWLSDI* 1766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0503 1765 MobiDBLite consensus disorder prediction 348 373 - -
Aev03g0503 1765 SUPERFAMILY PAH2 domain 373 443 IPR036600 GO:0006355
Aev03g0503 1765 SMART hdac_interact2seq4b 820 920 IPR013194 -
Aev03g0503 1765 MobiDBLite consensus disorder prediction 1360 1374 - -
Aev03g0503 1765 Coils Coil 889 913 - -
Aev03g0503 1765 MobiDBLite consensus disorder prediction 1389 1408 - -
Aev03g0503 1765 Gene3D Paired amphipathic helix 380 442 IPR036600 GO:0006355
Aev03g0503 1765 Gene3D Paired amphipathic helix 167 229 IPR036600 GO:0006355
Aev03g0503 1765 Gene3D Paired amphipathic helix 15 78 IPR036600 GO:0006355
Aev03g0503 1765 SUPERFAMILY PAH2 domain 457 529 IPR036600 GO:0006355
Aev03g0503 1765 SUPERFAMILY PAH2 domain 7 79 IPR036600 GO:0006355
Aev03g0503 1765 Pfam C-terminal domain of Sin3a protein 1455 1701 IPR031693 -
Aev03g0503 1765 PANTHER PAIRED AMPHIPATHIC HELIX PROTEIN SIN3-LIKE 2 ISOFORM X1 161 297 - -
Aev03g0503 1765 PANTHER PAIRED AMPHIPATHIC HELIX PROTEIN SIN3-LIKE 2 ISOFORM X1 331 1721 - -
Aev03g0503 1765 PANTHER PAIRED AMPHIPATHIC HELIX PROTEIN SIN3-LIKE 2 ISOFORM X1 9 130 - -
Aev03g0503 1765 MobiDBLite consensus disorder prediction 1233 1316 - -
Aev03g0503 1765 MobiDBLite consensus disorder prediction 748 790 - -
Aev03g0503 1765 PANTHER SIN3B-RELATED 161 297 IPR039774 GO:0003714
Aev03g0503 1765 PANTHER SIN3B-RELATED 331 1721 IPR039774 GO:0003714
Aev03g0503 1765 PANTHER SIN3B-RELATED 9 130 IPR039774 GO:0003714
Aev03g0503 1765 Gene3D Paired amphipathic helix 253 325 IPR036600 GO:0006355
Aev03g0503 1765 Gene3D Paired amphipathic helix 458 530 IPR036600 GO:0006355
Aev03g0503 1765 MobiDBLite consensus disorder prediction 1286 1307 - -
Aev03g0503 1765 MobiDBLite consensus disorder prediction 531 653 - -
Aev03g0503 1765 Pfam Sin3 family co-repressor 822 913 IPR013194 -
Aev03g0503 1765 MobiDBLite consensus disorder prediction 559 644 - -
Aev03g0503 1765 ProSiteProfiles PAH domain profile. 374 444 IPR003822 GO:0006355
Aev03g0503 1765 MobiDBLite consensus disorder prediction 1137 1162 - -
Aev03g0503 1765 MobiDBLite consensus disorder prediction 1105 1125 - -
Aev03g0503 1765 MobiDBLite consensus disorder prediction 536 551 - -
Aev03g0503 1765 MobiDBLite consensus disorder prediction 753 789 - -
Aev03g0503 1765 ProSiteProfiles PAH domain profile. 9 80 IPR003822 GO:0006355
Aev03g0503 1765 MobiDBLite consensus disorder prediction 1233 1254 - -
Aev03g0503 1765 SUPERFAMILY PAH2 domain 665 730 IPR036600 GO:0006355
Aev03g0503 1765 Gene3D Paired amphipathic helix 659 732 IPR036600 GO:0006355
Aev03g0503 1765 MobiDBLite consensus disorder prediction 348 362 - -
Aev03g0503 1765 ProSiteProfiles PAH domain profile. 661 730 IPR003822 GO:0006355
Aev03g0503 1765 MobiDBLite consensus disorder prediction 1096 1125 - -
Aev03g0503 1765 SUPERFAMILY PAH2 domain 256 323 IPR036600 GO:0006355
Aev03g0503 1765 Coils Coil 502 522 - -
Aev03g0503 1765 MobiDBLite consensus disorder prediction 1349 1419 - -
Aev03g0503 1765 ProSiteProfiles PAH domain profile. 161 231 IPR003822 GO:0006355
Aev03g0503 1765 MobiDBLite consensus disorder prediction 1137 1174 - -
Aev03g0503 1765 SUPERFAMILY PAH2 domain 162 230 IPR036600 GO:0006355
Aev03g0503 1765 Pfam Paired amphipathic helix repeat 184 228 IPR003822 GO:0006355
Aev03g0503 1765 Pfam Paired amphipathic helix repeat 397 441 IPR003822 GO:0006355
Aev03g0503 1765 Pfam Paired amphipathic helix repeat 484 527 IPR003822 GO:0006355
Aev03g0503 1765 Pfam Paired amphipathic helix repeat 683 727 IPR003822 GO:0006355
Aev03g0503 1765 Pfam Paired amphipathic helix repeat 33 77 IPR003822 GO:0006355
Aev03g0503 1765 ProSiteProfiles PAH domain profile. 460 530 IPR003822 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0503 Aev-Chr3 3650718 3672736 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0503 356 456 WRKY Transcription Factor Family AT4G12020 58.416 2.74e-25 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aev03g0503 Sin3a_C 3.7e-57 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0503 K11644 - gmx:100781798 2008.8