Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0502 ATGAGTGGAGGAGAAGGAGGAAGTGGTGATCTGATGAAACTGACGGAGGATGATGCGAGAGCATATTTGCAAGCGATCAAGGACACGCTTGATTTTCACGACGAAAGGGAAAAGTACGACACTTTCCTTCAAATCATGAAGGATTACAAAGCTAAAAGAATTGCTCCTGATCTTACGATAGAAAGAGTGAAGGAGCTGTTTAAAGCGTACAATAAGCTGATTTTGGGATTCAACAAATTCTTGTCCCCTGATAAACAAATCAAGCTTTCAGAGCAGGATAAACACCCTAATCATGATGACGCTTGTTTCAATTTCGTCCGCAATGTCAAGGCTCGGTTTGGAGAAGATAGTGAAGAATTCAATTTGTTTTACAATACAATTAAATTTCACAGAGAAGGAACCAAGATTCGTGCTATGATTTTTCAAAATCTTGCCGAAATTATTAAGGACCATGAAGATCTTCTTGTTGAATTTAATCATATGTATGGAGATATTTTAGCACCAAAATCTGCTCCTGCTAATGTGGAGCACCAGCAACTTCATTCTCAAAAGGAGAATGAAAGGGCCAACAAGGAAGTTGTTTCAGGTCCTATAAGTCAGTTGGACCTTTCTAACTGTGAGCAATGCACTCCCAGTTATCGTCTTCTACCGAAAAAATACATAGTGTTACCGAGTGCGAGGGCAGAACTTGGTGCACAAGTACTGAATGATGAATTGATATTAACTTCAAGAAAGAGATTTTGCCTCAAAGTATCGCGCAAAAATGAACACGAAGGGATCTTGTTGAATTGCGAAGATGACAGGCATGAACTAGACATGTTGATAGAGCATGCAAATTATGCAGCAAAGCAAATTGAACAAGTAATGAACAAGATCAATACCAATGTAGTTAAAGGAGATGGTCCATTTTGTATTAAGGATCACTTCACAGGTTATGGTCTCTTATCCATTATTGATCAATCAACATGTATTTTCTCTGTATCAGCTTCAAACCTTAGAATAATTCAACGAGCGTACGCTGAAAATAACAGAGTGATACCTTGGTTAAGGGAGAATCCATCTCAAGCTTTGCCAGCCATATTAAGCCGCTTGAAGCAGAAACAGGACAACTGGAAAAATAGGCAGTTGAAAACTTCATGGACTAAAATGTATACTAAGAACTATCACAAATCACTTGATCATCGTAGGTGTTACTTTGAGGAGCAAAACCAAATAGTCTTGAGCGATGAAGCATTACTGGCAGAAGTAAAAGGAAACAGAGAGAAGAAACGAGAAGAGGATAACATGGTTGTCACGAGTTTTGGTGGAGAGAGAAGGCCTTGTATTCCTCATTTGGAATACGAGTATCCTGATTCAGAGGTTCATCAGGATATGTATCAGATCATAAAATACTCATGTGGGGAGGTTTGTGCATATGAAGAGGTGTACAAAGTTTTGAAAATATGGAGGAACCTTTTAGAGCCGATGCTTGGGGTTACTTCTCAACCACATGGTGCTGAGGGGGATAGTAAGTTTGATCCCATTAAGAAGTTAGCCAAAGCTAATTTCTCAAAGGCAGAGGGATTGAAGCAAATTATTGCAAAGGACTCTGCAGATCATGCTTCAGGACCTACTGCTACTCCATCAAGACCTGATTTACCTTCGTTAGAGAGGGCTAAACCAGCTAGAGATGGAACCTCAGTGTCTACTGACACTCAATACAGTCCTCAAGTGTTTTATGGAAACGATTCAATTTACATACTCTTTAGACTCCATCAGACATTGTATGAGAGGTTACAATTAGCAAAGAGAATCTCACTGTTAGCTGATAAAAGTAAGTCAAAGGCTAAATATAACAGGTTCTTGACAGAACTTTACAATTTGCTGGATGGTTTCTCTGATATTAAGAAATTTGAGGATCAATGTCGAGATATTTTTGGAACTCGGTCATATCTTTTTCTGATAATACACAAACTGATACATAAACTGGTTAACCAGCTAAAAGCAGTTGCTCGTGATGAAATGAATACCACACTTGTTCTGCTTTATGAATATGAGAAATTAAGAAAACCTGGAAGATTCATCGATAAAGTTTATAGTTCTAATGCTCGTCTTCTTCTCCCAGATAAAAACATTTATCGTTTTGAATGTGTTAACCACCACGACCCACCAAATTGTCTATTCAGCTGTTGGACAATGAAGTTAGAGTGA 2190 0.384 MSGGEGGSGDLMKLTEDDARAYLQAIKDTLDFHDEREKYDTFLQIMKDYKAKRIAPDLTIERVKELFKAYNKLILGFNKFLSPDKQIKLSEQDKHPNHDDACFNFVRNVKARFGEDSEEFNLFYNTIKFHREGTKIRAMIFQNLAEIIKDHEDLLVEFNHMYGDILAPKSAPANVEHQQLHSQKENERANKEVVSGPISQLDLSNCEQCTPSYRLLPKKYIVLPSARAELGAQVLNDELILTSRKRFCLKVSRKNEHEGILLNCEDDRHELDMLIEHANYAAKQIEQVMNKINTNVVKGDGPFCIKDHFTGYGLLSIIDQSTCIFSVSASNLRIIQRAYAENNRVIPWLRENPSQALPAILSRLKQKQDNWKNRQLKTSWTKMYTKNYHKSLDHRRCYFEEQNQIVLSDEALLAEVKGNREKKREEDNMVVTSFGGERRPCIPHLEYEYPDSEVHQDMYQIIKYSCGEVCAYEEVYKVLKIWRNLLEPMLGVTSQPHGAEGDSKFDPIKKLAKANFSKAEGLKQIIAKDSADHASGPTATPSRPDLPSLERAKPARDGTSVSTDTQYSPQVFYGNDSIYILFRLHQTLYERLQLAKRISLLADKSKSKAKYNRFLTELYNLLDGFSDIKKFEDQCRDIFGTRSYLFLIIHKLIHKLVNQLKAVARDEMNTTLVLLYEYEKLRKPGRFIDKVYSSNARLLLPDKNIYRFECVNHHDPPNCLFSCWTMKLE* 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0502 729 Gene3D Paired amphipathic helix 18 81 IPR036600 GO:0006355
Aev03g0502 729 Gene3D Paired amphipathic helix 101 161 IPR036600 GO:0006355
Aev03g0502 729 Pfam Paired amphipathic helix repeat 37 81 IPR003822 GO:0006355
Aev03g0502 729 ProSiteProfiles PAH domain profile. 12 84 IPR003822 GO:0006355
Aev03g0502 729 SUPERFAMILY PAH2 domain 101 162 IPR036600 GO:0006355
Aev03g0502 729 Pfam Sin3 family co-repressor 207 295 IPR013194 -
Aev03g0502 729 Pfam C-terminal domain of Sin3a protein 572 607 IPR031693 -
Aev03g0502 729 Pfam C-terminal domain of Sin3a protein 604 713 IPR031693 -
Aev03g0502 729 SMART hdac_interact2seq4b 205 302 IPR013194 -
Aev03g0502 729 ProSiteProfiles PAH domain profile. 95 165 IPR003822 GO:0006355
Aev03g0502 729 PANTHER SIN3B-RELATED 6 727 IPR039774 GO:0003714
Aev03g0502 729 SUPERFAMILY PAH2 domain 13 83 IPR036600 GO:0006355
Aev03g0502 729 MobiDBLite consensus disorder prediction 530 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0502 Aev-Chr3 3637098 3641021 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0502 7 96 WRKY Transcription Factor Family AT4G12020 40.000 5.80e-14 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aev03g0502 Sin3a_C 7.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0502 K11644 - han:110921203 390.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0502 03 3637098 3641021 Aev03g0502 03 3637098 3641021 ECH