Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0500 ATGATGAGTGGAGATTCTTGGAAACTAACCAAAAAAGATGCATTAGCATATCTCAATGTAGTAAAGATTACACTTCAAGATGAGAGGGAAAAGTATGAGAGCTTTTTGGATGTCATGAAGGATTTCAGGGCAAAAAGGCTTGACATTATTGGTTGCATAGCAAAAGTGAAAGAGCTGTTTAAAGGGCATAGAGGTCTAATTATAGGATTTAATGTGTTCGTACCAATGGGATATGAAATCATGCTTCCATTGGAGGATGAACAAACTCCCCTGAACAATCAGCCTAATGGAGTTGGAGATGCCTTATATTTTAAAGACAAGATTAAGGTTGATGTGCTTTTGAAGAGCCACGAAGATCTTCTTAATGAGTTTACAAAGTTGCTTCCAAAACTATCCAATAGTGAAACTCTCTGA 414 0.3671 MMSGDSWKLTKKDALAYLNVVKITLQDEREKYESFLDVMKDFRAKRLDIIGCIAKVKELFKGHRGLIIGFNVFVPMGYEIMLPLEDEQTPLNNQPNGVGDALYFKDKIKVDVLLKSHEDLLNEFTKLLPKLSNSETL* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0500 137 Gene3D Paired amphipathic helix 13 75 IPR036600 GO:0006355
Aev03g0500 137 PANTHER SIN3B-RELATED 6 130 IPR039774 GO:0003714
Aev03g0500 137 ProSiteProfiles PAH domain profile. 7 77 IPR003822 GO:0006355
Aev03g0500 137 Pfam Paired amphipathic helix repeat 30 73 IPR003822 GO:0006355
Aev03g0500 137 SUPERFAMILY PAH2 domain 7 75 IPR036600 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0500 Aev-Chr3 3631353 3631984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0500 4 87 WRKY Transcription Factor Family AT4G12020 41.667 3.54e-15 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aev03g0500 PAH 2.8e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0500 K11644 - vvi:100243213 137.502