Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0490 ATGGATCCGGGTGCGATGATGAACGAAGGTTCGTTTGGGAATGGGAGTGGCAATACGACGCCGTATAGCTTGGCGGAGATCTGGCAGTTCCCGCAGGCCGTGAACGGCGGTGGCGGCGGCGGGGGGCTTGGGCTGAGGAGGCCGCAGTTCGGTTTGGGACAGTCTGGGGATTTCTCGAACGGTCCGAACCGGGATGGTTCGGAGCAGAGGGCGGCGAATGGTAGGAAGAGGCGTGACTCAGAGGAGGAATCTGCTAAGGCCGTTTCCACCAGCAATGGTGGTGCCAATGGCGTTTTGAATGATGGAGATGGAAAGCGGCTTAAAGGATCATCAGGGAACAGGAATGAGAGCTTAAGCCGTGGTGATGGAAGTAATAAAGTTGAAGGAGGAGGAGGAGGAGGTGAAGCCAGTTCAGGAAAGCATGCGGAGCAAAGCAATCAGCCACCTCCTGAACCTCCTAAGCAAGATTACATCCATGTTCGAGCTCGAAGGGGTCAAGCTACTGATAGCCATAGTCTTGCTGAGAGAGCTAGAAGGGAAAAGATTAGTGAAAGGATGAAAATTCTTCAGGATTTGGTCCCTGGTTGCAATAAGGTTATTGGGAAAGCACTGGTCCTGGATGAGATAATTAATTATATCCAATCTCTTCAGCGCCAAGTTGAGTTTTTATCAATGAAGCTTGAAGCAGTGAATTCTAGACTGAACACTGGTATTGAAGCTTTTCCTCCTAAAGATTTTGGTCAACAAACATACGATCCCGCCAGCTTGCCATACGGTTCGCAAGCCACTAGAGAATATAGCAGAGGTTCTTCGCCGGAGTGGTTACATATGCAGGTAGGAGGCGCTTTCGAAAGAACAACGTAG 864 0.5046 MDPGAMMNEGSFGNGSGNTTPYSLAEIWQFPQAVNGGGGGGGLGLRRPQFGLGQSGDFSNGPNRDGSEQRAANGRKRRDSEEESAKAVSTSNGGANGVLNDGDGKRLKGSSGNRNESLSRGDGSNKVEGGGGGGEASSGKHAEQSNQPPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNTGIEAFPPKDFGQQTYDPASLPYGSQATREYSRGSSPEWLHMQVGGAFERTT* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0490 287 CDD bHLH_AtBPE_like 156 241 - -
Aev03g0490 287 MobiDBLite consensus disorder prediction 53 67 - -
Aev03g0490 287 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 164 233 IPR036638 GO:0046983
Aev03g0490 287 MobiDBLite consensus disorder prediction 1 156 - -
Aev03g0490 287 PANTHER BNAC05G07950D PROTEIN 1 287 - -
Aev03g0490 287 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 287 IPR024097 GO:0006355
Aev03g0490 287 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 166 216 IPR011598 GO:0046983
Aev03g0490 287 SMART finulus 172 222 IPR011598 GO:0046983
Aev03g0490 287 MobiDBLite consensus disorder prediction 69 85 - -
Aev03g0490 287 MobiDBLite consensus disorder prediction 11 26 - -
Aev03g0490 287 Coils Coil 213 233 - -
Aev03g0490 287 Gene3D - 163 239 IPR036638 GO:0046983
Aev03g0490 287 Pfam Helix-loop-helix DNA-binding domain 170 217 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0490 Aev-Chr3 3555475 3557878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0490 1 245 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 53.488 7.70e-72 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev03g0490 HLH 2.4e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0490 - - gmx:100784478 378.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0490 03 3555475 3557878 Aev03g0490 03 3555475 3557878 ECH
Aev05g1377 05 9928753 9931898 Aev03g0490 03 3555475 3557878 PCT