Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0469 ATGGAGGGTGTGAAGCTTTATGGAGGTTCAAGCATCACAGTTCTGCTCGAAAATGAAAGGCTTCATTGCCCCTCTGAACCTTTTGAGCCTCTCTGGCCTCACTCCTCTGAACCTTCTTTTCAAGGTTCAAGATCAGTGGTTAACTTTGAGAATGTTGGTGGCAGCATGATGATGGATAGGCCCTTTTTCCAAGCTGGTGTAGAGAGAGAAGAGAAGGTTGATGATGATGAGTTGTATGAGGGTTGCTTCCATCAAAGCAAGAAAAGGAGGCTCACAAGTGAACAGGTTCAGTTTCTTGAGAGGAACTTCGAGGTAGAGAACAAGCTTGACCCTGAAAGGAAGATTCAGCTTGCAAAGGATCTTGGCTTGCATCCAAGGCAAGTTGCCATATGGTTCCAAAACAGAAGGGCAAGGTTCAAGACCAAGCAGATAGAGAGAGATTATGGTGCACTCAAAGCTAGCTTTGACAGCCTCAAATCTGAACATGACAATCTTGTTCAAGAGAATCAGAGGCTAAAACAAGAGGTGAGTTCTCTCAAGAAGAGATTGGTTCCTAGAGAGAAAGAGGAAGAGAATTTTGGTGACAAGTTGATTGATTCAGAGAAAATATTAGAACAAGACATGGATTTGGTATCAAATGCATGTTCCAAGAATGAGTCCACAGTGGCAGTAGTTCCTATGATGGTCATGTGCAAACAGGAAGATGCAAATTCTGCTAAGAGTGATGTGCTTGATTCATCAGATAGCCCAAATTACTCTGATTTCTCTCAGGATGAAGAGGATAACATGAACCATGAACTCTTCACTACCCTGCCATTCTTGCCAAAGGTTGAAGATGATGATTGTTATCATGCACCACATGATAATAATTCTTGCAATTTTGGGTTCCCAATTGATGATCCTACTGTTTTTGGTCTTACTGAGTCATATTATTACTAG 939 0.4185 MEGVKLYGGSSITVLLENERLHCPSEPFEPLWPHSSEPSFQGSRSVVNFENVGGSMMMDRPFFQAGVEREEKVDDDELYEGCFHQSKKRRLTSEQVQFLERNFEVENKLDPERKIQLAKDLGLHPRQVAIWFQNRRARFKTKQIERDYGALKASFDSLKSEHDNLVQENQRLKQEVSSLKKRLVPREKEEENFGDKLIDSEKILEQDMDLVSNACSKNESTVAVVPMMVMCKQEDANSAKSDVLDSSDSPNYSDFSQDEEDNMNHELFTTLPFLPKVEDDDCYHAPHDNNSCNFGFPIDDPTVFGLTESYYY* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0469 312 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 253 IPR045224 GO:0003700
Aev03g0469 312 MobiDBLite consensus disorder prediction 238 259 - -
Aev03g0469 312 PRINTS Lambda-repressor HTH signature 113 122 IPR000047 GO:0003677
Aev03g0469 312 PRINTS Lambda-repressor HTH signature 122 138 IPR000047 GO:0003677
Aev03g0469 312 Pfam Homeodomain 87 140 IPR001356 GO:0003677
Aev03g0469 312 Gene3D - 82 148 - -
Aev03g0469 312 CDD homeodomain 87 143 IPR001356 GO:0003677
Aev03g0469 312 MobiDBLite consensus disorder prediction 240 257 - -
Aev03g0469 312 ProSiteProfiles 'Homeobox' domain profile. 82 142 IPR001356 GO:0003677
Aev03g0469 312 Coils Coil 155 182 - -
Aev03g0469 312 ProSitePatterns 'Homeobox' domain signature. 117 140 IPR017970 GO:0000981|GO:0006355
Aev03g0469 312 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 253 303 IPR045224 GO:0003700
Aev03g0469 312 SUPERFAMILY Homeodomain-like 84 144 IPR009057 -
Aev03g0469 312 SMART HOX_1 85 146 IPR001356 GO:0003677
Aev03g0469 312 PANTHER HOMEOBOX LEUCINE ZIPPER FAMILY PROTEIN 253 303 - -
Aev03g0469 312 PANTHER HOMEOBOX LEUCINE ZIPPER FAMILY PROTEIN 1 253 - -
Aev03g0469 312 Pfam Homeobox associated leucine zipper 142 183 IPR003106 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0469 Aev-Chr3 3429345 3430507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0469 42 183 Homeobox Transcription Factor Family AT3G01470 53.147 3.38e-40 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Aev03g0469 Homeodomain 1.8e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0469 - K09338 adu:107489132 311.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0469 03 3429345 3430507 Aev03g0469 03 3429345 3430507 ECH
Aev05g1430 05 10538336 10540301 Aev03g0469 03 3429345 3430507 PCT
Aev03g0469 03 3429345 3430507 Aev05g1401 05 10187483 10190018 PCT