Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0460 ATGGAGCATGCAACTGTAAAGAGTGAATTCATCCCAAGGAGTCACAGGTTGGTGATGGATAGTGAAGCTAATGCCACTAGGTGTGTCAAAAGGCGGCGAAGAGATTCGTCTATGGCGGCGGTGTTAGGGGCTAATGAAGAGACAGAGGAACAGCAGCCTAAGGGTGGCCACCAATCAGCCCCTACAACTGTGAAGAGAAGCTCAAGGCATAGGTGGACTGGAAGATTTGAAGCACATTTATGGGATAAAGGCACATGGAATCCCACTCAGAAGAAGAAAGGGAAACAAGGGGCTTATAATGATGAAGAAGCAGCTGCTAGAGCTTATGATTTAGCTGCAATCAAGTACTGGGGAACATCAACATTCATCAATTTCCCTGTATCTGATTATGAGAAAGAAATTGAGATAATGAAAACTGTAACCAAAGAAGAATATCTTGCTTCATTGAGAAGGAGAAGCAGTGGTTTTTCTAGAGGTGTATCAAAGTACAGAGGAGTAGCAAGACACCATCACAATGGAAGATGGGAAGCAAGGATTGGCAGAGTGTTTGGCAACAAGTACCTCTACCTTGGGACTTACAGTACACAAGAAGAGGCAGCTCGTGCATATGATATTGCGGCAATCGAATACAGAGGCATTAATGCAGTGACAAACTTTGATTTGAGCAGTTACATTAGATGGCTAAGACCAGGAGGAGCATATTCTACTCTTTCTCAAGAGCAAAAGCCAAGCACAAACCCTCAAACCTTTATGCCCTCTAACCTCATTCAAACCAAAGGAACATCTGAGGTATCCAACTTCAACTTCAACTCATTCCCTGGTGAATTGGACAGCATCAAGAAACAAGACTTTTCCAAGTGTATGACCCGTTTAAGTCCATACAACAATAAGTCATCTTCCCCAACAGCATTAGGACTTCTTCTTAAGTCCTCAGTGTTTAGAGAACTGATGCAGAGAAATCTGAATTATGCTAGTGAAGATGCTGAAGAAGTTGAACTGAAATTCCCACAAGAGGGCAGTGATGATGGGATTGGAGGGCTAATTGATAATGACCTTAACAGAAACTCTCATTTGTGCTCTTCCAATATCAACAAATTACCTGACTTGGTGTCATCAGAGGAGAACACAATGACAATGTATCATAGAATTTCACCAACTTTATGGAATGGTGCTTTCAACTTGTCTAACTGA 1191 0.4215 MEHATVKSEFIPRSHRLVMDSEANATRCVKRRRRDSSMAAVLGANEETEEQQPKGGHQSAPTTVKRSSRHRWTGRFEAHLWDKGTWNPTQKKKGKQGAYNDEEAAARAYDLAAIKYWGTSTFINFPVSDYEKEIEIMKTVTKEEYLASLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGINAVTNFDLSSYIRWLRPGGAYSTLSQEQKPSTNPQTFMPSNLIQTKGTSEVSNFNFNSFPGELDSIKKQDFSKCMTRLSPYNNKSSSPTALGLLLKSSVFRELMQRNLNYASEDAEEVELKFPQEGSDDGIGGLIDNDLNRNSHLCSSNINKLPDLVSSEENTMTMYHRISPTLWNGAFNLSN* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0460 396 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 382 - -
Aev03g0460 396 ProSiteProfiles AP2/ERF domain profile. 52 126 IPR001471 GO:0003700|GO:0006355
Aev03g0460 396 CDD AP2 161 222 IPR001471 GO:0003700|GO:0006355
Aev03g0460 396 Gene3D AP2/ERF domain 161 222 IPR036955 GO:0003700|GO:0006355
Aev03g0460 396 Gene3D AP2/ERF domain 64 128 IPR036955 GO:0003700|GO:0006355
Aev03g0460 396 SMART rav1_2 69 132 IPR001471 GO:0003700|GO:0006355
Aev03g0460 396 SMART rav1_2 162 226 IPR001471 GO:0003700|GO:0006355
Aev03g0460 396 Pfam AP2 domain 161 212 IPR001471 GO:0003700|GO:0006355
Aev03g0460 396 MobiDBLite consensus disorder prediction 43 69 - -
Aev03g0460 396 ProSiteProfiles AP2/ERF domain profile. 162 220 IPR001471 GO:0003700|GO:0006355
Aev03g0460 396 SUPERFAMILY DNA-binding domain 68 128 IPR016177 GO:0003677
Aev03g0460 396 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 382 - -
Aev03g0460 396 SUPERFAMILY DNA-binding domain 161 222 IPR016177 GO:0003677
Aev03g0460 396 Coils Coil 314 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0460 Aev-Chr3 3358570 3360681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0460 62 224 AP2-EREBP Transcription Factor Family AT5G57390 65.868 4.62e-74 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev03g0460 AP2 8.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0460 - - gmx:100799621 565.844