Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0454 ATGGGAAGACAAAGTCCTGGGAAATGGATCAGAAACTTGCTTCTAGGGAAGAAATCATCATCAAAGTCTAAATCATCAAAAAAGAAGGATGTTCCTAAACCTTCAAGTAACAAGGATGTGCTGGTTGTGTCTTCTGAGGGATCCATGCCTTTTCCAACTGTGGCTTCCCCTCCAACAACATCAGGAGCTTATGCTACCAAAGGAGTGATATCAGAAAATGAAGTAGTTATTAGTGGATCATCAAATGAGAGGGTTATTCTTGCAATTGGAGATGAACAGACCAATTCACAAGAAGATGTTGCTAATATTGCTCCTGAGGATCATACACAGAAAATCAGGCTCACAGAAGCAGCTATAATAGCTCAAGCAGCTTTTAGAGGCTATCAGGCGCGTAGGAAATTTCGAATACTCAAAGGTATGGTACACCTGCAAGCTCTTATTCGCGGCCAATTGGTTAGAAGAGAAGCTGTTTCTGCTCTTTACTGTGTGAAGAGGATAGTAAAATTTCAAGCATTGGCTCGTGGTTACAAGGTTAGGCACTCTGGTATTGGTCTTGAAGTAGTCCAGAAAATTTCTAAGGATACTAAATGTTCAAATTCTATTGGAGTAGTCAGATCCAGAGAGGCAGAGAAGATTTCAGATAATGCCTTTGTTCTCAAGCTTCTGTCTTATTCATCACCCTCCACAGTTTCTCCAAATCTAAAATATGATTCTAGAGAACCTGACTTGGGTTGGGAATGGCTTAACCGTTGGACAAGATCACACTTTTGGGCACCTCTTCCAGAATCAAAGAAGCTTGATTCAGTGTCTGAAACAGTTGAAACTGATGAGAGAAAAGTCAAAAGAGATCCAAAAAAGGATTCAAACAACAAATTGCATTCACATTCACAGAAGGAAAATGAGAAAAAAAGTAACTCTAAAAAAACCAGCATAAAGAATGTTCCTGATAGACCTGATGAGGTTGCTAATGAGAAAAGTAGAAAACAACACAACAGCACAAGAAAAAGCTCAGATAATACTGTCACTTATGTCACAGAGAATGATAAGAATTTCCAGAGAAGAGCTTCACTGCCTGCAAATTTTACAAATCACAATAATGATCAGTTATTACAAGAAACTACTCCAAAAAGAGTTCCCAGTTATATGGCTCCTACTGAATCTGCAAAGGCTAAGCTAAGAGGACAAGGGTCCCCAAGGTTTAATACTGATTTGGTAGATAAAAATGGTAGTATAAATAGGAGACTATCACTATCATCTTCACTTAATGGGAAGTTAGGTCTGTTTTCTCCAAAATCAGAAAGATTGGTAGCCATGAGCAACAAGACAGACAAATCTTTGTCATCTTCAAGGGATTGGACAGATAAATTAATGCAACCTCAGTGGAGAAGGTGA 1392 0.3872 MGRQSPGKWIRNLLLGKKSSSKSKSSKKKDVPKPSSNKDVLVVSSEGSMPFPTVASPPTTSGAYATKGVISENEVVISGSSNERVILAIGDEQTNSQEDVANIAPEDHTQKIRLTEAAIIAQAAFRGYQARRKFRILKGMVHLQALIRGQLVRREAVSALYCVKRIVKFQALARGYKVRHSGIGLEVVQKISKDTKCSNSIGVVRSREAEKISDNAFVLKLLSYSSPSTVSPNLKYDSREPDLGWEWLNRWTRSHFWAPLPESKKLDSVSETVETDERKVKRDPKKDSNNKLHSHSQKENEKKSNSKKTSIKNVPDRPDEVANEKSRKQHNSTRKSSDNTVTYVTENDKNFQRRASLPANFTNHNNDQLLQETTPKRVPSYMAPTESAKAKLRGQGSPRFNTDLVDKNGSINRRLSLSSSLNGKLGLFSPKSERLVAMSNKTDKSLSSSRDWTDKLMQPQWRR* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0454 463 MobiDBLite consensus disorder prediction 1 40 - -
Aev03g0454 463 MobiDBLite consensus disorder prediction 439 463 - -
Aev03g0454 463 Pfam Protein of unknown function (DUF4005) 360 442 IPR025064 -
Aev03g0454 463 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 363 460 - -
Aev03g0454 463 ProSiteProfiles IQ motif profile. 114 142 IPR000048 GO:0005515
Aev03g0454 463 ProSiteProfiles IQ motif profile. 138 165 IPR000048 GO:0005515
Aev03g0454 463 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 332 - -
Aev03g0454 463 MobiDBLite consensus disorder prediction 267 342 - -
Aev03g0454 463 MobiDBLite consensus disorder prediction 439 455 - -
Aev03g0454 463 SMART iq_5 161 183 IPR000048 GO:0005515
Aev03g0454 463 SMART iq_5 113 135 IPR000048 GO:0005515
Aev03g0454 463 SMART iq_5 136 157 IPR000048 GO:0005515
Aev03g0454 463 Pfam IQ calmodulin-binding motif 139 155 IPR000048 GO:0005515
Aev03g0454 463 Pfam IQ calmodulin-binding motif 164 179 IPR000048 GO:0005515
Aev03g0454 463 Pfam IQ calmodulin-binding motif 115 135 IPR000048 GO:0005515
Aev03g0454 463 PANTHER IQ-DOMAIN 5-RELATED 363 460 - -
Aev03g0454 463 PANTHER IQ-DOMAIN 5-RELATED 1 332 - -
Aev03g0454 463 MobiDBLite consensus disorder prediction 267 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0454 Aev-Chr3 3319682 3322154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0454 346 463 IQD Protein Family AT1G18840 37.984 1.64e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0454 - - gmx:100800688 417.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0454 03 3319682 3322154 Aev03g0454 03 3319682 3322154 ECH
Aev03g0454 03 3319682 3322154 Aev01g2103 01 25518187 25523536 ECH