Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0449 ATGCAAGATATGAAGGAGGAGAAGAAAAAGCAGAACTGCAATGAAGAGTCTAAGAAGAAGGAGCGTCACATTGTGACTTGGACTCAAGAGGAGGATGATATACTCAGAGAGCAGATTGGTATCCATGGAACTGAAAATTGGGCAATTATTGCATCTAAGTTCAAGGATAAGACAACAAGACAGTGCAGAAGAAGATGGTACACTTACCTGAATTCTGATTTCAAGAAAGGTGGATGGTCACCGGAGGAAGACATGCTCTTGTGTGAGGCTCAAAAAATATTTGGTAACAGATGGACGGAAATAGCAAAGGTGGTTTCAGGAAGAACGGATAATGCCGTGAAAAATCGTTTCTCTACACTCTGCAGAAAGAGAGCAAAACATGAAGCTTTAGCAAAAGAGAACAGCATTTCATACATCAATTCAAATAACAAGAGAACTGTTTTCCAACTTGGTTATAATGCAGATGCAACATCATCAGAATCTGCTTTAGCTATTAAGAAGATGAGGAGGGCCCATATCCCTGATGATGGAGAAAAGACCAAGTATGGAGATAGATCTCATTTGAGAAATGGAACTCCAATAAATCACGAGCCAAGAACACCGTTTGCGGTATTAACTCAGAACTCCAACAATGAAAACAACTTGCCAAATCGGCATCATGTTTCCAATTCCAAGTTTACTGGTTCTGCTCAAGATAATAAGATTGAAGGAACATTCATCAAAAAAGATGACCCAAAGATAAGAGCATTGATGCAACAAGCGGAGTTGCTTAGTCAACTTGCTCAAAATGTTGATACAGAGGACATGGACCAAAGACTTGAAAATGCATGGAAGGTTCTTCAAGAGTTTCTGAACCGAAGCAAAGAATCAGACATCCCTAGACGCAAGTTGCAGTTCATAGATCTTAAAAATATGGTGGAGGACTTGAAGAGTAGCAATGAGGGAAGCCAATCATGCTGGAGGCAAATGGAACTATATGAAGACTCTCCAGCCAATTCTGAATACAGTACCGGATCAACTGTTCCGCCTCCCTCAGCTACTGATGACTTTGAAAACTCGCTGCATAAGGATACAGGCATTGAAATGAAGTCTACAATAACTGAAGATATGAATGAAGTTGATGGATGTGAGAAAGGGGTTCTTTCTACTACAACTGCGGATCAAGATATGCTGCTGTGTTGTGAAGAACAGGTGAAAAATGATGGTATTATTTCTTCCTCATCAAGATCGGACTTCGGCTCCCCTGTTCAAGTAACCCCTCTATTCAGATCCTTGGCTGCTGGAATTCCCAGCCCACAATTTTCAGAAAGTGAAAGGAACTTCCTAAGGAAAACACTTGGAATGGAGTCTCCATCCTTCAACCCAAGCGCCAACCCGTCACAACCACCGCCCTGCAAAAGAGCCCTGCTAGAAAGTTTACAATCCACTTGA 1431 0.4144 MQDMKEEKKKQNCNEESKKKERHIVTWTQEEDDILREQIGIHGTENWAIIASKFKDKTTRQCRRRWYTYLNSDFKKGGWSPEEDMLLCEAQKIFGNRWTEIAKVVSGRTDNAVKNRFSTLCRKRAKHEALAKENSISYINSNNKRTVFQLGYNADATSSESALAIKKMRRAHIPDDGEKTKYGDRSHLRNGTPINHEPRTPFAVLTQNSNNENNLPNRHHVSNSKFTGSAQDNKIEGTFIKKDDPKIRALMQQAELLSQLAQNVDTEDMDQRLENAWKVLQEFLNRSKESDIPRRKLQFIDLKNMVEDLKSSNEGSQSCWRQMELYEDSPANSEYSTGSTVPPPSATDDFENSLHKDTGIEMKSTITEDMNEVDGCEKGVLSTTTADQDMLLCCEEQVKNDGIISSSSRSDFGSPVQVTPLFRSLAAGIPSPQFSESERNFLRKTLGMESPSFNPSANPSQPPPCKRALLESLQST* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0449 476 MobiDBLite consensus disorder prediction 447 476 - -
Aev03g0449 476 CDD SANT 26 70 IPR001005 -
Aev03g0449 476 MobiDBLite consensus disorder prediction 330 349 - -
Aev03g0449 476 SUPERFAMILY Homeodomain-like 23 117 IPR009057 -
Aev03g0449 476 Coils Coil 1 21 - -
Aev03g0449 476 ProSiteProfiles Myb-like domain profile. 27 70 IPR001005 -
Aev03g0449 476 MobiDBLite consensus disorder prediction 175 199 - -
Aev03g0449 476 CDD SANT 79 120 IPR001005 -
Aev03g0449 476 Pfam Myb-like DNA-binding domain 27 87 - -
Aev03g0449 476 Gene3D - 14 75 - -
Aev03g0449 476 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 75 125 IPR017930 -
Aev03g0449 476 MobiDBLite consensus disorder prediction 1 21 - -
Aev03g0449 476 Gene3D - 77 147 - -
Aev03g0449 476 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 74 IPR017930 -
Aev03g0449 476 MobiDBLite consensus disorder prediction 330 347 - -
Aev03g0449 476 PANTHER TRANSCRIPTION FACTOR MYB88 6 470 - -
Aev03g0449 476 MobiDBLite consensus disorder prediction 175 192 - -
Aev03g0449 476 ProSiteProfiles Myb-like domain profile. 71 121 IPR001005 -
Aev03g0449 476 PANTHER MYB PROTEIN-RELATED 6 470 - -
Aev03g0449 476 SMART sant 23 72 IPR001005 -
Aev03g0449 476 SMART sant 75 123 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0449 Aev-Chr3 3290180 3293855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0449 15 321 MYB Transcription Factor Family AT2G02820 60.383 5.93e-133 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev03g0449 Myb_DNA-bind_6 8.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0449 K09422 - gmx:100807667 680.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0449 03 3290180 3293855 Aev05g1425 05 10476094 10482106 PCT