Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0445 ATGGCTTTCTTCCCAGCAAATTTCATGCTACAAACCCCTCATCATCACCAAGATGACCATCATCATCAGCCTCCACCTTCACTCAACTCAATCCTAACCTCATGTACACCTCAAGAATACCATGGAGGAGGAGCCTTTCTAGGGAAGAGATCTATGTCATTCTCAGGGATAGAACTGGGAGGAGAAGAAGGAAATAATGCAGAGGAAGAGTTGTCAGATGATGGATCACAAGCAGGGGAGAAGAAGAGGAGGCTGAGCATGGAGCAAGTGAAGACACTTGAGAAGAGCTTTGAATTGGGGAACAAGCTTGAGCCTGAGAGGAAAATGCAGCTGGCAAGGGCTCTTGGTCTTCAGCCAAGACAGATTGCAATATGGTTTCAGAACAGAAGGGCAAGGTGGAAGACTAAGCAGTTGGAGAAAGACTATGATCTCCTCAAGAGACAATTTGAAGCTGTCAAGGCTGATAATGATGCACTTCAGGCTCAGAACCAAAAACTTCAGACTCAGATACTGGCACTGAAAAGTAGAGAACCAACTGAGTCAATCAACCTGAACAAAGAGACAGAGGGATCAATAAGCAGCAATAGAAGTGAGAACAGTTCAGAGATCAAATTGGATATGTCAACAAGGACAACACAAGCAGCTATAGACAGTCCTATATCCACTACTCATCACAGCACAATTAGCAGAACACTCTTTCCACCATCATCATCATCTGCAAGACCAGCAGCAACAGGGGTGCCTCATCAGCTTTTCCAAACTACTACTACTACTTGTTCATCATCAAGGCCTGAAATCCAGTGCCAGAAGAACATTGATCATCATCATCATCATCAAATGGTCAAAGAAGAGAGCTTGAGCAACATGTTCTGTGCCATTGATGATCAATCTGGACTCTGGCCATGGTTGGAGCAGCAGAATTTCAATTGA 930 0.443 MAFFPANFMLQTPHHHQDDHHHQPPPSLNSILTSCTPQEYHGGGAFLGKRSMSFSGIELGGEEGNNAEEELSDDGSQAGEKKRRLSMEQVKTLEKSFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFEAVKADNDALQAQNQKLQTQILALKSREPTESINLNKETEGSISSNRSENSSEIKLDMSTRTTQAAIDSPISTTHHSTISRTLFPPSSSSARPAATGVPHQLFQTTTTTCSSSRPEIQCQKNIDHHHHHQMVKEESLSNMFCAIDDQSGLWPWLEQQNFN* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0445 309 PRINTS Lambda-repressor HTH signature 107 116 IPR000047 GO:0003677
Aev03g0445 309 PRINTS Lambda-repressor HTH signature 116 132 IPR000047 GO:0003677
Aev03g0445 309 MobiDBLite consensus disorder prediction 181 246 - -
Aev03g0445 309 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 309 IPR045224 GO:0003700
Aev03g0445 309 Pfam Homeodomain 81 134 IPR001356 GO:0003677
Aev03g0445 309 ProSiteProfiles 'Homeobox' domain profile. 76 136 IPR001356 GO:0003677
Aev03g0445 309 Coils Coil 128 176 - -
Aev03g0445 309 MobiDBLite consensus disorder prediction 57 84 - -
Aev03g0445 309 ProSitePatterns 'Homeobox' domain signature. 111 134 IPR017970 GO:0000981|GO:0006355
Aev03g0445 309 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-13 1 309 - -
Aev03g0445 309 Pfam Homeobox associated leucine zipper 136 176 IPR003106 GO:0006355|GO:0043565
Aev03g0445 309 CDD homeodomain 81 137 IPR001356 GO:0003677
Aev03g0445 309 Gene3D - 73 142 - -
Aev03g0445 309 SMART HOX_1 79 140 IPR001356 GO:0003677
Aev03g0445 309 SUPERFAMILY Homeodomain-like 74 138 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0445 Aev-Chr3 3267524 3269197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0445 1 309 Homeobox Transcription Factor Family AT1G69780 59.048 3.44e-113 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Aev03g0445 Homeodomain 7.1e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0445 K09338 - gmx:100801479 417.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0445 03 3267524 3269197 Aev03g0445 03 3267524 3269197 ECH