Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0420 ATGGACTTGACCTCCAACAATACTAGAACTAGTAGTACCCACAACACCATAGACACAGATACTAAAACCCCACCACTTACCCAACCCACCAACACCCCAAAGTCTCTATCTTTCACCACCGTCACACTCAAGCGCCTCCCTCACCTCCACTCCACAACCACCGCCGCCACCATGGTGGCAATTTCTTACAAGGAGTGCCTCAAGAATCATGCCGCAAGCATAGGTGGCCATGCACTTGATGGTTGTGGTGAGTTCATGCCTTCCTCCTCCACCAACCCCACCGACCCTCGCTCCCTCAAGTGCGCCGCCTGCGGCTGCCACCGTAATTTCCATCGCCGTGACCCTCCAGAACCTTCCACAACAACAACCACCCCAAACAACAACAACCACAACCCGAGTTTCCTGAACTGCTTCTACTCCCCACCACCACCACCGCCTTCAGCTGCTGAAGCCACCACGACTGCACCGCCGCCACTGCCGCCTCAACCTCTGCCTCACCGTGCCATGAGCCAGAGCACTAGCCCCAGCCTCAGTTCTAGCCCAAGCCATAGTCCTAGCCCCATGTCAAGCCCTTCTTCACCACCACCACTCTCACATGTTCCACCTTCATACCACCACCACCACCACCATCATTCCTCTGCTCCTCACATGCTTTTAGCCCTTGGTAATGCTTACTCTGCTGTTGCATTACCCTCCTCTGATCATCATCATCATCATGAGCACCACAGGAACAACAACAACAACTCTTCTTCAATGGCGGTGAAGGGTCATCATCATGGTGGTGTAGAGAACACCACCAATAATAGCAATAGTAATAGTAAGAAGAGGTACAGGACAAAGTTCAGCCAGGAGCAGAAGGAGAAGATGTATAGCTTCTCAGAGAGGTTGGGTTGGAGAATGCAGAAAGTTGATGATGGCCTTGTTCAGGAATTCTGTAATGACATTGGTGTCCCTAGAGGTGTCTTCAAGGTTTGGATGCACAACAACAAGAACACCTTCAACAAGATCAAGAGATCAGATCAGCAGCTTGTTGGAATTACTGATGCTGGTGGTGGAAACAATCCTCAGAATAATAATAACAGCATTGATGATCATCACAAGATCAATAACAGTAATGATGAAGAAGAAGATGATGAAGAAGATGGAAATGGCCCTTTCAACACCAATGGCGGCAACAACAATAACAGTGATGACATTCACAGAAGTAGTGCTGCTGAAGATAACAATAGCTGTGTCAATGTTCATGTTCCAATCAATGGGTTGTCATCATCTTAA 1275 0.4886 MDLTSNNTRTSSTHNTIDTDTKTPPLTQPTNTPKSLSFTTVTLKRLPHLHSTTTAATMVAISYKECLKNHAASIGGHALDGCGEFMPSSSTNPTDPRSLKCAACGCHRNFHRRDPPEPSTTTTTPNNNNHNPSFLNCFYSPPPPPPSAAEATTTAPPPLPPQPLPHRAMSQSTSPSLSSSPSHSPSPMSSPSSPPPLSHVPPSYHHHHHHHSSAPHMLLALGNAYSAVALPSSDHHHHHEHHRNNNNNSSSMAVKGHHHGGVENTTNNSNSNSKKRYRTKFSQEQKEKMYSFSERLGWRMQKVDDGLVQEFCNDIGVPRGVFKVWMHNNKNTFNKIKRSDQQLVGITDAGGGNNPQNNNNSIDDHHKINNSNDEEEDDEEDGNGPFNTNGGNNNNSDDIHRSSAAEDNNSCVNVHVPINGLSSS* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0420 424 MobiDBLite consensus disorder prediction 1 35 - -
Aev03g0420 424 Gene3D - 260 335 - -
Aev03g0420 424 MobiDBLite consensus disorder prediction 166 186 - -
Aev03g0420 424 MobiDBLite consensus disorder prediction 345 365 - -
Aev03g0420 424 MobiDBLite consensus disorder prediction 187 201 - -
Aev03g0420 424 MobiDBLite consensus disorder prediction 110 214 - -
Aev03g0420 424 MobiDBLite consensus disorder prediction 385 424 - -
Aev03g0420 424 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 274 331 IPR006455 -
Aev03g0420 424 MobiDBLite consensus disorder prediction 261 276 - -
Aev03g0420 424 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 63 114 IPR006456 -
Aev03g0420 424 Pfam ZF-HD protein dimerisation region 61 114 IPR006456 -
Aev03g0420 424 MobiDBLite consensus disorder prediction 345 424 - -
Aev03g0420 424 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 63 114 IPR006456 -
Aev03g0420 424 MobiDBLite consensus disorder prediction 137 165 - -
Aev03g0420 424 SUPERFAMILY Homeodomain-like 264 335 IPR009057 -
Aev03g0420 424 MobiDBLite consensus disorder prediction 116 136 - -
Aev03g0420 424 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 44 341 - -
Aev03g0420 424 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 9 44 341 - -
Aev03g0420 424 MobiDBLite consensus disorder prediction 233 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0420 Aev-Chr3 3048514 3049788 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0420 43 344 ZF-HD Transcription Factor Family AT1G69600 38.235 1.65e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Aev03g0420 ZF-HD_dimer 4.9e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0420 - - vra:106766949 296.975