Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0418 ATGAGTGATCATCTGGTGCTGTACGTTGACCGGCTGGTGCGCCCAGTTGTGCCGGTGGAGCCGCTCGCTCAGCACCCTGTTCAGCCATCACCGGAGCCCGATCCGCCCCTGGATGCGGCTGCCGGGCCATCCGGCTCTGCTCCGGCGGCGGCGCCGGCGGTGGAGGTGGAGGATGAAGACGACGGTGATGAGGAGGAGCCGCTCTTGCAGATGGCGGAGTGTCGCATTTGTCAAGAGGAGGACAGCCTCAGCAATCTCGAGTCACCCTGTGCCTGCAGCGGAAGTCTCAAGTATGCTCACAGAAAGTGCGTTCAGCATTGGTGCGATGAGAAAGGAGACATAACTTGTGAGATATGTCATAAGTCCTATCAACCTGGTTATACTGCCCCACCACCTCGTCCACACCCTGAAGAAACTACCATTGATATAGGTGGAGGCTGGACAATCTCCGGCACACCTTTGGACTTGCGTGATCCTCGTCTCTTGGCAATTGCTGAGGCAGAACGCCAATTCTTGGAAGCAGAATACGATGGATATGCTGCTTCTAATGCCAGTGGTGCTGCATTTTGCCGTTCAGCTGCTCTAATTTTAATGGCCCTTTTACTCTTAAGGCATGCGCTTTCGGTCACGGATGCTGATACTGATGATGATCCATCCACTTTCTTCTCTCTTTTCTTGCTTCGAGCTGCTGGATTTCTCTTGCCTTGCTACATCATGGCTTGGGCAATCAGTATTTTGCAACGCCGGCGACAACGACAAGAGGCTGCAGCACTAGCGGCGACTCAAGTTGCATTTGTTTTACAATCCGGGCAGCGTAGGGGTCTGCAATTCGCCATAACACCAGGAACAACAGTGAATAGTGCACACCAGGAACAAGTGTAG 882 0.5374 MSDHLVLYVDRLVRPVVPVEPLAQHPVQPSPEPDPPLDAAAGPSGSAPAAAPAVEVEDEDDGDEEEPLLQMAECRICQEEDSLSNLESPCACSGSLKYAHRKCVQHWCDEKGDITCEICHKSYQPGYTAPPPRPHPEETTIDIGGGWTISGTPLDLRDPRLLAIAEAERQFLEAEYDGYAASNASGAAFCRSAALILMALLLLRHALSVTDADTDDDPSTFFSLFLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATQVAFVLQSGQRRGLQFAITPGTTVNSAHQEQV* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0418 293 CDD RING_CH-C4HC3_MARCH 74 120 - -
Aev03g0418 293 Pfam Protein of unknown function (DUF3675) 125 243 IPR022143 -
Aev03g0418 293 PANTHER E3 UBIQUITIN-PROTEIN LIGASE MARCH-RELATED 1 280 - -
Aev03g0418 293 MobiDBLite consensus disorder prediction 22 38 - -
Aev03g0418 293 Pfam RING-variant domain 74 119 IPR011016 GO:0008270
Aev03g0418 293 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 1 280 IPR033275 -
Aev03g0418 293 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 59 129 IPR013083 -
Aev03g0418 293 Coils Coil 162 182 - -
Aev03g0418 293 MobiDBLite consensus disorder prediction 22 65 - -
Aev03g0418 293 SMART ringv_2 73 120 IPR011016 GO:0008270
Aev03g0418 293 SUPERFAMILY RING/U-box 72 124 - -
Aev03g0418 293 ProSiteProfiles Zinc finger RING-CH-type profile. 66 126 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0418 Aev-Chr3 3030132 3032543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0418 73 120 C3H Transcription Factor Family AT2G37950 43.137 1.10e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0418 - - ahf:112734090 424.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0418 03 3030132 3032543 Aev03g0418 03 3030132 3032543 ECH