Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0413 ATGGATCTGAAAAATGTGCAAAGCCAAAGTATGCATTTGGTTCTTTCAACTGATGCAAAGCCAAGGCTGAAATGGACTCCTGAGCTTCACCAACGATTCATTGAGGCAATTAATCAGCTTGGTGGTGCAGAAAAGGCAACTCCAAAGAGTCTTATGAGGGTGATGGGGATTCCAGGACTCACTCTGTACCACCTCAAGAGCCATTTACAGAAATATAGGCTTGGGAAAAGCCACCAGCTAGAAATCTGCTCTGACAACAAAATTGAAGATTGCAGAGAAATCAAGAGCAGTGATGGTCCTTGCAGCAGGGAAGCCAGTGTGGGGACCCAGAATGAGATGAATGAGAGCATGCATATTGCTCAGGCTCTCCAAGTGCAGATGGAAGTACAGAAGAAACTTTATGAACAAATTGAGGTGCAGAGACATTTGCAGCTTAAGATTGAAGCTCAAGGGAAGTATTTGCAATCAGTACTAAAGAAGGCACAGGATACACTATCAGGATACAGTTCCTCCTCCACATTGGGTGTAGAATTTGCAAAAGCTGAACTTTCTCAGTTAGTATCAATAATCAACAATGCATGCCCAAATTCTCCCATGTCAGAACTCACAGAAACAAGAGGGTTCAGTTTGAGCTTTGGGGAGAGGAAACAGAATAGAGGGACTATGTGTTCACTTGAAAGCTCTTTGACATCTTCTGAAAGCTCTGGGAGTAAAGAAGAGAAGCAAGCCATGGATCATGAAGCAGATAACACTCAAAAGCCTGATTCTACTTCTGTTTCAGTTGAATTGCCATTGTTGGCCATTCATCCAGAAGAGCACAAAGAATCCAAGGAAGGTACAAGTGAGCATGAAGGTTGTGGGAGGAAGAGAAGTGCTGATTCTGATGGCAGCTGTGTTGATCAACCATGTGGGAGCAGATGCGGCAACAAGTTGAGGAAATCTGAATTATCAGTAATGCTTGACTTGAACACCCAATATCACAAAGACATTGACACAAGTCCAAAAGAAATAGATTTAAATTGCAGTTCAAGCTTTTGGGGACAATGA 1047 0.4269 MDLKNVQSQSMHLVLSTDAKPRLKWTPELHQRFIEAINQLGGAEKATPKSLMRVMGIPGLTLYHLKSHLQKYRLGKSHQLEICSDNKIEDCREIKSSDGPCSREASVGTQNEMNESMHIAQALQVQMEVQKKLYEQIEVQRHLQLKIEAQGKYLQSVLKKAQDTLSGYSSSSTLGVEFAKAELSQLVSIINNACPNSPMSELTETRGFSLSFGERKQNRGTMCSLESSLTSSESSGSKEEKQAMDHEADNTQKPDSTSVSVELPLLAIHPEEHKESKEGTSEHEGCGRKRSADSDGSCVDQPCGSRCGNKLRKSELSVMLDLNTQYHKDIDTSPKEIDLNCSSSFWGQ* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0413 348 Pfam MYB-CC type transfactor, LHEQLE motif 117 163 IPR025756 -
Aev03g0413 348 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 77 IPR017930 -
Aev03g0413 348 Pfam Myb-like DNA-binding domain 22 73 IPR001005 -
Aev03g0413 348 MobiDBLite consensus disorder prediction 238 252 - -
Aev03g0413 348 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 20 75 IPR006447 GO:0003677
Aev03g0413 348 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 5 345 - -
Aev03g0413 348 SUPERFAMILY Homeodomain-like 19 75 IPR009057 -
Aev03g0413 348 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 5 345 IPR044848 GO:0003700
Aev03g0413 348 MobiDBLite consensus disorder prediction 219 309 - -
Aev03g0413 348 MobiDBLite consensus disorder prediction 267 295 - -
Aev03g0413 348 Coils Coil 120 140 - -
Aev03g0413 348 MobiDBLite consensus disorder prediction 219 237 - -
Aev03g0413 348 Gene3D - 19 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0413 Aev-Chr3 3006080 3007583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0413 11 332 G2-like Transcription Factor Family AT1G69580 51.190 2.87e-83 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aev03g0413 Myb_DNA-binding 1.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0413 - - gmx:100805252 444.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0413 03 3006080 3007583 Aev03g0413 03 3006080 3007583 ECH