Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0410 ATGGTCTATGCAGACATGGGTTCCCTTTCTCTCGGTGTAGTCTCTGCCGTTTCTTCATCATCTCAATCTCAAGACTGTTATGTAGGTCTCAACAACACAACCTACTGGGGTGGTGCTGCTGGTGCTTTCCCTTTTCTGAGTAGAAACTTTGAGGAACACCAAAACATGAGTGATGATGCTGTGGAAGGTACTGCTACTAACACTACTACTAGCGGCGATGATGGGGTTGGGGAAAACAACAGTGAGAGACTAATGAGCCATAATAATATTAATAATGATAGTAGTAATAATAATAATAATAATAATAATAATAATAATGGTAACAACTTCAACAACGATGAGAGCCCTAATGAGAATAATTCTGGAGGTGGGAGCGGCAAGGAAGGAGACAGTACTGGGCAGTCAAAGCTATGTGCAAGAGGGCACTGGAGGCCTGCAGAAGATTCCAAGCTCAAGGAGCTTGTTGCTCTTTATGGCCCTCAGAACTGGAACCTCATTGCTGAAAAGTTAGAAGGAAGATCAGGTAAGAGTTGTAGGCTGAGATGGTTCAACCAGTTGGACCCAAGGATCAACAGGAGAGCATTCACAGAGGAAGAAGAGGAGAGGCTAATGCAGGCTCATAGGATATATGGGAACAAATGGGCCATGATTGCAAGGCTGTTCCCTGGGAGAACTGATAATGCTGTGAAGAACCATTGGCATGTCATAATGGCAAGGAAGTACAGAGAACAATCCAGTGCTTACAGGAGGAGGAGGCTTACCCAATCTGTTTACAGGAGAATGGATCATCAAGAAAATAATATTAGTAATACAATGGCAACAAGCTTTGTCCCTAAAGATGTTGTTGTTGGAGGGACAGAACAACCACCACATCCACCACCACCCTATTATTGTCTCAGCCTCCCCAATGGTGTGGCAGGTTTCCCTTATGCTGCAGCACCATTCCATGGTGGGGTTGAGTTTGGGTTGAATGGCTGTTCTTCTCCCCACATGATGATGGGTGGTGGGAGAGAAGCAGCCAAACAGGCCCCTACTTCTTACACTGCCTTGTATGCTCAACAGCCACCTTTTGATTTCTTCTCTGGGGGGAGAAGCAATGAAATGGTGGGAGAGTATGTGAACCAGAGCAGGTATTGGGAACAACAGCAGCATCATCATCATCATGAGCATCAAGCACCTGGTTACTATCCACATTATGATGAAGCACAGTATGTGGTGGCAATGCAACAGCAAAACAATCACAATAATATTTATTACAACAGCTTCACATCAAATTCCACAGCAGCACAGGTTTTGGGCAGTGAAGCCTCATTGTCATCATCCGTAGCAGAGCACAGAGATCAAGCCCTGAACAGTAGTAGAGACCCCCCAGATGCAGCAATTCCACCTCCATTTATTGACTTTCTTGGGGTAGGAGCCACATCGTGA 1428 0.4517 MVYADMGSLSLGVVSAVSSSSQSQDCYVGLNNTTYWGGAAGAFPFLSRNFEEHQNMSDDAVEGTATNTTTSGDDGVGENNSERLMSHNNINNDSSNNNNNNNNNNNGNNFNNDESPNENNSGGGSGKEGDSTGQSKLCARGHWRPAEDSKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFTEEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRRLTQSVYRRMDHQENNISNTMATSFVPKDVVVGGTEQPPHPPPPYYCLSLPNGVAGFPYAAAPFHGGVEFGLNGCSSPHMMMGGGREAAKQAPTSYTALYAQQPPFDFFSGGRSNEMVGEYVNQSRYWEQQQHHHHHEHQAPGYYPHYDEAQYVVAMQQQNNHNNIYYNSFTSNSTAAQVLGSEASLSSSVAEHRDQALNSSRDPPDAAIPPPFIDFLGVGATS* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0410 475 MobiDBLite consensus disorder prediction 439 463 - -
Aev03g0410 475 Pfam Myb-like DNA-binding domain 192 235 IPR001005 -
Aev03g0410 475 Pfam Myb-like DNA-binding domain 140 186 IPR001005 -
Aev03g0410 475 ProSiteProfiles Myb-like domain profile. 187 237 IPR001005 -
Aev03g0410 475 SMART sant 191 239 IPR001005 -
Aev03g0410 475 SMART sant 139 188 IPR001005 -
Aev03g0410 475 CDD SANT 143 184 IPR001005 -
Aev03g0410 475 CDD SANT 194 234 IPR001005 -
Aev03g0410 475 Gene3D - 140 191 - -
Aev03g0410 475 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 140 186 IPR017930 -
Aev03g0410 475 PANTHER MYB PROTEIN-RELATED 92 474 - -
Aev03g0410 475 Gene3D - 193 267 - -
Aev03g0410 475 MobiDBLite consensus disorder prediction 62 137 - -
Aev03g0410 475 MobiDBLite consensus disorder prediction 62 132 - -
Aev03g0410 475 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 187 241 IPR017930 -
Aev03g0410 475 ProSiteProfiles Myb-like domain profile. 140 186 IPR001005 -
Aev03g0410 475 PANTHER MYB TRANSCRIPTION FACTOR 92 474 - -
Aev03g0410 475 PANTHER MYB TRANSCRIPTION FACTOR 1 100 - -
Aev03g0410 475 PANTHER MYB PROTEIN-RELATED 1 100 - -
Aev03g0410 475 SUPERFAMILY Homeodomain-like 140 233 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0410 Aev-Chr3 2969529 2971377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0410 49 257 MYB Transcription Factor Family AT1G69560 60.287 2.86e-77 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev03g0410 Myb_DNA-binding 2.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0410 K09422 - gmx:100804537 405.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0410 03 2969529 2971377 Aev03g0410 03 2969529 2971377 ECH