Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0404 ATGGAGGGAAGTAGTAGTAGTACAAGCTCTGAACTCCCACCTGGATTTAGATTCCATCCTACAGATGAGGAACTAATTGTGTACTATCTCTGTAACCAAGCCACATCACAGCCTTGCCCTGCATCAATTATCCCAGAAGTGGATATCTATAAATTTGATCCATGGGATTTGCCTGATAAGGCTGTGTTTGGAGAAAAAGAATGGTACTTCTTTACTCCAAGGGACAGGAAGTACCCAAATGGGGTGAGGCCTAACCGTGCAACTGTGTCTGGGTATTGGAAGGCTACTGGCACAGATAAGGCTATATATAGCAAGTCTAAGCATATTGGGGTGAAGAAAGCTTTGGTCTTTTACACTGGTAAACCACCAAAGGGCATTAAGACTGATTGGATCATGCATGAGTATAGACTCATTGAATCAAAAAGGCAAACCAACAAGCCACTTGGATCCATGAGACTTGATGACTGGGTCTTGTGTAGGATCTACAAGAAGAAGCACACGGCAAAACCATTGGATTTGGAGCAGAGAGAGGAATATCCAACAGTTGAAATTAATCTCACAGCAGCAAGTAATGATGGTGGTGAAAATGAAATAATGAACCTACCAAGGACTTGTTCTCTCACTTATCTTATGGATATGAATTGCTTTGGTCCAATTTCACAACTATTGGATGATGGACCCTATAACTCAGCCTTTGATTTTCATAATAGCAGTGACAATATTGGAATAGACCCCTTTGTGAAACCTGAGCTGCTTGAGATGACTAATCATTATGCAGATGATTCAGGGTACCAAATGAAACAGGGGAGCACTATGAACCAGCACATATTTATGAAGCAAGTGCATGATCTGAGAGGATATGAACAATAG 870 0.4126 MEGSSSSTSSELPPGFRFHPTDEELIVYYLCNQATSQPCPASIIPEVDIYKFDPWDLPDKAVFGEKEWYFFTPRDRKYPNGVRPNRATVSGYWKATGTDKAIYSKSKHIGVKKALVFYTGKPPKGIKTDWIMHEYRLIESKRQTNKPLGSMRLDDWVLCRIYKKKHTAKPLDLEQREEYPTVEINLTAASNDGGENEIMNLPRTCSLTYLMDMNCFGPISQLLDDGPYNSAFDFHNSSDNIGIDPFVKPELLEMTNHYADDSGYQMKQGSTMNQHIFMKQVHDLRGYEQ* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0404 289 ProSiteProfiles NAC domain profile. 12 164 IPR003441 GO:0003677|GO:0006355
Aev03g0404 289 PANTHER NAC DOMAIN-CONTAINING PROTEIN 1 9 242 - -
Aev03g0404 289 PANTHER NAC TRANSCRIPTION FACTOR 56 9 242 - -
Aev03g0404 289 Pfam No apical meristem (NAM) protein 13 137 IPR003441 GO:0003677|GO:0006355
Aev03g0404 289 Gene3D NAC domain 21 169 IPR036093 GO:0003677|GO:0006355
Aev03g0404 289 SUPERFAMILY NAC domain 8 164 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0404 Aev-Chr3 2913605 2914712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0404 1 258 NAC Transcription Factor Family AT1G69490 57.778 5.14e-104 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev03g0404 NAM 1.6e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0404 - - gmx:732552 422.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0404 03 2913605 2914712 Aev03g0404 03 2913605 2914712 ECH