Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0403 ATGGACACAACAAAGCCACAGCAAGAAATGGCAGAAGAAGAGTACATGCAGCACCTCAGGTCCAAAGCCACTGAGCTATTCCTCAGAGAAGAATGGAAGGACTCAATCGAAGCCTATTCCCAATTCATCACCGTCTCCACACAAAACCGACACCTCCAAAAGCATCACAAATCCCTCTGTATAGCACTCTGCAACCGCGCCGAAGCTAGGTCTCGGCTTCGAGACTTCCACAGTGCCTTACAGGACTGTGATCAAGCCTTGCAGGTCGATGCAACACACTTCAAGACCCTGCTCTGTAAGGGTAAGATCTTGCTCTGCCTCAACAGGTACTCACTGGCACTTGAATGCTTCAGAACCGCTATGCTTGACCCTCAAGCTGGTGGGAACTCTGAAATCCTTAATGGGTATGTGGAGAAGAGCAAAAAGTTTGAATTTTTGGCGAGGACAGGGTCCATGGACTTATCAGATTGGGTTTCAAATGGGTTTCGTGGTAGGGCTCCGGAGCTTGCAGAGTACATTGGTGCTGTTGAGATCAGAAAATCTGAGATCAGTGGGCGTGGTTTGTTTGTAACCAAGAACATTGATGCAGGGTCGTTGATCTTGGTCACAAAAGCAATAGCCATGGAGAGGAGTATATTAACAGGTAAAGATCTGAGTGAAGATGCCCAGTTAGTTATGTGGAAGAATTTCATTGGGAAAGTTGCTGAATTTGCTAGGAAGTGTCATAAAACAAGGGATTTGATTGGTGTGTTGTCAAATGGGGAAGATGATGAGGATGCACTTGAGGTTCCTGATATAAGTCTCTTTAGGCCTGAGAGTGTTGGGAATGTGAATTCATGTGATGAGATTGATATGGGCAAGTTGTTAGCTATATTGGATGTTAATTCACTCACTGAGGATGCAGTTTCAGCCAATGTGTTGAGTAAGAACAATGACTTCTATGGTGTTGGGTTGTGGCTGCTTCCTTCATTCATCAACCATTCATGTTGTCCCAATGCAAGGAGATTGCATGTTGGGGACTACTTGATAGTTCATGCTTCCAAAGACCTCAAGGCTGGTGAAGAGGTCACTTTTGCATATTTGGATCCTCTGTGTCCTTTGACCAAGCGAAAGGAGATGTGGACGACATGGGGAATTCATTGCAAGTGTAAGAGGTGCAGGTTTGAAGGGGAAATTTTCTCAAAACAAGAGATGAAGGAGATTGAGATTGGACTTGAGAGAGGGATGGATGTGGGTGGTGTGGTGTACAAATTGGAGGAACACATGAAGAGATGGAAAGTAAGAGGGAAAGAAAAGGGCTATTTGAGGGCATCATTTTGGTCTGCATATTCTGAGGCTTATAGATCAGATAGGTCTATGAAGAGGTGGGGAAGGCGGATTCCGGCGATGGATGATGTGATAAGTAGCATCGTCGATGTCGTTGGAGGGGATCACAGGTTGCTTAAGATCATGATGGAGGAGTTGAAGAAAAATGGTGGTGGCCATTTGGAGATGGAGAAAGCCTTGAAGCTAGCAAGAGATGTGTATGGGAAAGTGATGAAAAAGCAAGCAATGAGGACAATTCTTGAGCTCAGCATTGGTGAATGA 1587 0.4512 MDTTKPQQEMAEEEYMQHLRSKATELFLREEWKDSIEAYSQFITVSTQNRHLQKHHKSLCIALCNRAEARSRLRDFHSALQDCDQALQVDATHFKTLLCKGKILLCLNRYSLALECFRTAMLDPQAGGNSEILNGYVEKSKKFEFLARTGSMDLSDWVSNGFRGRAPELAEYIGAVEIRKSEISGRGLFVTKNIDAGSLILVTKAIAMERSILTGKDLSEDAQLVMWKNFIGKVAEFARKCHKTRDLIGVLSNGEDDEDALEVPDISLFRPESVGNVNSCDEIDMGKLLAILDVNSLTEDAVSANVLSKNNDFYGVGLWLLPSFINHSCCPNARRLHVGDYLIVHASKDLKAGEEVTFAYLDPLCPLTKRKEMWTTWGIHCKCKRCRFEGEIFSKQEMKEIEIGLERGMDVGGVVYKLEEHMKRWKVRGKEKGYLRASFWSAYSEAYRSDRSMKRWGRRIPAMDDVISSIVDVVGGDHRLLKIMMEELKKNGGGHLEMEKALKLARDVYGKVMKKQAMRTILELSIGE* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0403 528 SUPERFAMILY SET domain 175 386 IPR046341 -
Aev03g0403 528 Gene3D SET domain 276 390 IPR046341 -
Aev03g0403 528 CDD SET_SMYD 289 386 - -
Aev03g0403 528 ProSiteProfiles SET domain profile. 174 361 IPR001214 GO:0005515
Aev03g0403 528 Gene3D Tetratricopeptide repeat domain 12 144 IPR011990 GO:0005515
Aev03g0403 528 SMART tpr_5 16 49 IPR019734 GO:0005515
Aev03g0403 528 SMART tpr_5 60 93 IPR019734 GO:0005515
Aev03g0403 528 SMART tpr_5 94 126 IPR019734 GO:0005515
Aev03g0403 528 SUPERFAMILY TPR-like 15 121 IPR011990 GO:0005515
Aev03g0403 528 Pfam SET domain 185 360 IPR001214 GO:0005515
Aev03g0403 528 PANTHER TPR DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_5G12710) 8 514 - -
Aev03g0403 528 SMART set_7 174 367 IPR001214 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aev03g0403 SET 7.9e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0403 - - mtr:MTR_4g082140 818.535