Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0398 ATGGCTACTGTATTTTCAGTGTGTTCAGGTTCCTCTGCTTTTCCTTCCCCTTGCAGCACTTTCAACAGCAGAGGATTGTCCTTGTTATCCAAAGGGTCACAGCCACTTCTTCCCCTCAAGAGGCCAATCTCTGCAAAATCCCTTACTTCTTTGGAAACTGACATATCACTGCCACCAGCAGTTCAAACTTTCTGGCAATGGATGAAAGATGAAGGTGTTGTCTCTTCCAAGACCCCAGTGAAGCCTGGTTTGGTCCCTGAAGGCCTAGGGCTAGTTGCCCTTAAAGACATATCAAGAAATGAGGTTGTTCTTCAGGTTCCTAAGAGGTTTTGGATAAACCCTGATGCAGTTGCAGCTTCAGAGATTGGGAATGTGTGTAGTGGCTTGAAGCCATGGTTGTCTGTTGCATTGTTTCTCATATGGGAGAGGTCAAGGGAGGATTCTCTTTGGAAGCACTATTTCAGTATTCTGCCAAAGGAAACTGATTCTACTATTTATTGGTCAGAGGAGGAGCTCTCAGAGCTTCAAGGTACTCAACTTCTGAACACAACAACGGGTGTGAAAGAGTATGTGCAGAATGAATTCCTAAGGCTGCAAGAGGAAGTCATACTCCCTAATAAGAAGCTCTTCCCCTTTCCTATAACACTAGATGACTTCTTCTGGGCATTTGGAATTCTCAGATCAAGGGCATTTTCTCGCCTTCGCAACGAGAATCTTGTTGTTATTCCACTTGCAGACTTGATAAACCACAGTGTAAAGGTAACAACAGAAGATCATGCTTATGAAGTTAAAGGAGCAGCAGGGCTTTTCTCTTGGGACTACTTATTTTCCTTAAGGAGCCCCCTTTCTCTCAAGGCTGGGGAACAGGTATATATCCAATATGATTTGAACAAAAGCAATGCCGAGTTGGCTCTGGATTATGGTTTCATTGAACCGAATTCAGATCGCAATGCATACACCTTGACACTGGGGATACCTGAGTCAGATCCCTTTTATGATGACAAACTAGACATTGCTGAGACCAATGGTTTCGGTGAGACAGCATACTTTGACATCTTCTACAACCGCCCTCTCCCACCAGGGTTGATTCCATATCTGAGACTTGTAGCTCTAGGAGGCACTGATGCTTTCCTACTCGAAGCACTGTTCAGAAACACTGTCTGGGGTTATCTCGAAGTGCCTGTTAGCCGTGACAATGAGGAGCTAATATGCCGGGTGGTTCGAGAGGCCTGCAAATCTGCCCTTGCTGGTTATCATACAACCATTGAAGAGGATAACAAGTTAAAGGAAGGAAAACTAGATTCAAGGCTTGCAATAGCAGTAGGAATAAGAGAAGGAGAAAAGAAGGTCCTGCAGCAAATTGATGAGATCTTCAAGGAGAAAGAATTGGAATTGGACGAGTTAGAATATTATCAAGAAAGGAGGCTCAAGGACCTTGGTCTTTGTGGAGAAAATGGTGACATCCTAGGAGACCTTGAAAAGTTCATGTAA 1491 0.4406 MATVFSVCSGSSAFPSPCSTFNSRGLSLLSKGSQPLLPLKRPISAKSLTSLETDISLPPAVQTFWQWMKDEGVVSSKTPVKPGLVPEGLGLVALKDISRNEVVLQVPKRFWINPDAVAASEIGNVCSGLKPWLSVALFLIWERSREDSLWKHYFSILPKETDSTIYWSEEELSELQGTQLLNTTTGVKEYVQNEFLRLQEEVILPNKKLFPFPITLDDFFWAFGILRSRAFSRLRNENLVVIPLADLINHSVKVTTEDHAYEVKGAAGLFSWDYLFSLRSPLSLKAGEQVYIQYDLNKSNAELALDYGFIEPNSDRNAYTLTLGIPESDPFYDDKLDIAETNGFGETAYFDIFYNRPLPPGLIPYLRLVALGGTDAFLLEALFRNTVWGYLEVPVSRDNEELICRVVREACKSALAGYHTTIEEDNKLKEGKLDSRLAIAVGIREGEKKVLQQIDEIFKEKELELDELEYYQERRLKDLGLCGENGDILGDLEKFM* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0398 496 CDD SET_RBCMT 72 310 IPR044431 GO:0016279|GO:0018022
Aev03g0398 496 Gene3D set domain protein methyltransferase, domain 1 58 310 - -
Aev03g0398 496 PANTHER [FRUCTOSE-BISPHOSPHATE ALDOLASE]-LYSINE N-METHYLTRANSFERASE, CHLOROPLASTIC 40 488 - -
Aev03g0398 496 Pfam Rubisco LSMT substrate-binding 326 451 IPR015353 -
Aev03g0398 496 PIRSF RMT_SET 1 495 IPR011192 GO:0009507|GO:0030785
Aev03g0398 496 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 318 489 IPR036464 -
Aev03g0398 496 SUPERFAMILY SET domain 58 316 IPR046341 -
Aev03g0398 496 Pfam SET domain 88 294 IPR001214 GO:0005515
Aev03g0398 496 Coils Coil 492 496 - -
Aev03g0398 496 ProSiteProfiles SET domain profile. 71 295 IPR001214 GO:0005515
Aev03g0398 496 ProSiteProfiles Plant LSMT protein-lysine methyltransferase family profile. 11 494 IPR011192 GO:0009507|GO:0030785
Aev03g0398 496 SMART set_7 76 301 IPR001214 GO:0005515
Aev03g0398 496 Gene3D - 311 475 IPR036464 -
Aev03g0398 496 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 40 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0398 Aev-Chr3 2881403 2883891 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0398 61 258 NAC Transcription Factor Family AT3G56570 28.846 2.79e-10 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aev03g0398 SET 1.3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0398 K00592 - gmx:100818113 815.453