Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0391 ATGGTGAAGAGAAAAGAAAGGGAAGGTGAAAGTGTAGAAGCGAACACGACTGAATGGGAGCAGTTAAGGGAAGAAGCAGCATCAATGGCAGCAGCATTACTCGGAGCAAGACGAGCAAGGAAGCGTTACATCGGCGTGCGGCAAAGGCCTTCAGGGAGATGGGTTGCTGAGATCAAAGACACAATTCAGAACATTAGGCTATGGTTAGGCACTTATGACACTGCTGAAGATGCTGCTAGAGCCTACGATGAAGCGGCTCGCTTGCTTCGTGGTGCTAACACTCGCACAAATTTCTTTCAATGCCAGAATCCTCATTCTGTTCCTGCTCTTCCTCCAAAGATTGCAAAACTCCTCCTTCTTAGGCTCAAAGCTAGAAACATTGCCTCTTCTTGCATGGTTACTACTAGTACTACTACTACTCATTTTCCTAATAGCAACCATTATGAGCAAGAAACAACAGCAGAACCAGAACCAGAACCCCATTTCTTTCAACAAATGGAAGAACCCCACCTAGAGAGTTTTCTAGATATGGAGGGAAATAATGGGATTGTTGCAGAAAGTTATGATGATGGTGTCAGTTGCGGCTCTGCTTCCACAACTACTTGTGACTATAGTATTAGTGTAACTAATGAAGCAAATTTTGACCAAGAGGGTTGTAGAGAGAATTTCAGATTGGAGGGTGATTTTGGTGACAATGTTGATGATGGAAACAATATTCAGAATGTGAGGCCTAAAGGAGAGTTTGAAGACTGTGAAGTTGGATTCATTGACTTCCAGTTTTTGGACAGTGTTGGATCATTGAGCTCCTTTTCTTCTCCTTTTGAGATAGCTGAGGAAATGGTGGGGCCAATGGTGGAAGAGAAATTTGATATGGATGATTCACCATTTCTTAGAGAAACTCTGAGGATGAAGTTTGAACGCAAATTTTCAGCATGTCTCTACACATTCAATGGTGTTGCTGAGTGTCTGAGGCTACAAGTTGGACCTGAATAA 993 0.429 MVKRKEREGESVEANTTEWEQLREEAASMAAALLGARRARKRYIGVRQRPSGRWVAEIKDTIQNIRLWLGTYDTAEDAARAYDEAARLLRGANTRTNFFQCQNPHSVPALPPKIAKLLLLRLKARNIASSCMVTTSTTTTHFPNSNHYEQETTAEPEPEPHFFQQMEEPHLESFLDMEGNNGIVAESYDDGVSCGSASTTTCDYSISVTNEANFDQEGCRENFRLEGDFGDNVDDGNNIQNVRPKGEFEDCEVGFIDFQFLDSVGSLSSFSSPFEIAEEMVGPMVEEKFDMDDSPFLRETLRMKFERKFSACLYTFNGVAECLRLQVGPE* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0391 330 Gene3D AP2/ERF domain 41 100 IPR036955 GO:0003700|GO:0006355
Aev03g0391 330 PANTHER AP2/ERF DOMAIN TRANSCRIPTION FACTOR 1 329 - -
Aev03g0391 330 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 329 - -
Aev03g0391 330 SUPERFAMILY DNA-binding domain 42 98 IPR016177 GO:0003677
Aev03g0391 330 Pfam AP2 domain 42 91 IPR001471 GO:0003700|GO:0006355
Aev03g0391 330 CDD AP2 41 98 IPR001471 GO:0003700|GO:0006355
Aev03g0391 330 PRINTS Ethylene responsive element binding protein signature 43 54 IPR001471 GO:0003700|GO:0006355
Aev03g0391 330 PRINTS Ethylene responsive element binding protein signature 65 81 IPR001471 GO:0003700|GO:0006355
Aev03g0391 330 SMART rav1_2 42 105 IPR001471 GO:0003700|GO:0006355
Aev03g0391 330 ProSiteProfiles AP2/ERF domain profile. 42 99 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0391 Aev-Chr3 2856472 2857464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0391 40 98 AP2-EREBP Transcription Factor Family AT5G19790 76.271 7.47e-27 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev03g0391 AP2 4.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0391 K09286 - gmx:100793940 310.842