Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0387 ATGGTCGGTGTTGCTAACAGAGACCAACCACCCTCCACCTCGGCGGCGGAGGGAGCTGCACAGCCACGACCCACCATAACTCTGCCGCCGCACTCTTCAGCGGACACCTTTTTCGGCGGTGGTGCACCACCCTTTGCGTTCAGCCCTGGTCCCATGACTCTGGTCTCGAGCTTATTTGCCACTGACGGCAGCGGAAGCAACAACAACAGCGACGACTACAGGTCGTTCTCTCATCTTCTCGCTGGCGCTCCGGTTCAGTCTCCGCTGCCCATGTTCCCAATTTATGGGTTGCTCGATTCACCTTCAGCATTCTTTTCATCTCCTCAGGGGCAATTGGGTATGACACACCAGCAGACCCTAGAACAGGTCACAGCTCAAGCTGAAGTCACTTCAAATTCAACACATCAGATTATGCTACCATCAAAGCCAGACTCAGTGGGTAATTCTCACTCTGAACAAAGATTGCAACCTCCTCCTCCTCCTCCTCCTTCTTCTTCTTATTCTTCGGTGAATGTCGATAAGCCTAATGATGATGGCTACAACTGGAGGAAGTATGGGCAGAAACAGGTGAAAGGTAGTGAGTTCCCTCGCAGCTATTACAAGTGCACGCATCCAAAATGCCCTGTCAAGAAGAAGGTCGAGCGCTCCCTTGAAGGCCATGTAACTGCAATTATTTATAAAGGAGAGCACAACCATCAGTGTCCTCATCCTGACAAGATCACCAAAGACAGCACAATTGCAAATGCTAATTCAAATATGCAAGGGAATTGTGATTCATCAGTGTCTAAGATGGATTCTGGAACAAGCGACAATGAGGAAGTAGACGATCATGAGACTGAAGTAGATGGTGAGCCTGATGCCAAGAGGAGAAATACAGAATTCAGGAACACTGATCCAACCTCTTCTCATAGGGCTGTCACAGAGCCTAGAATCATTGTGCAAACAACAAGTGAGGTAGATCTCTTAGACGACGGCTATAGGTGGCGCAAATATGGCCAGAAAGTTGTCAAAGGCAATCCCTATCCAAGGAGCTATTACAAATGCACAACACCAAGTTGCAATGTTCGGAAGCATGTGGAGAGGGCATCAGCAGATCCTAAAGCTGTGATAACAACATATGAAGGAAAGCATAACCATGATGTGCCAGCAGCTAAGAGTAACAGTCACACTCTTGCAAACAATGCTGCATCACATCAGCTAAAGTCACAAAATGTCATGCTAGAGAGGCATAGTTTTGGCAGCAGAGGCATCGAGGGAAATGAGCCGCAACAACCTGTAGCGCGTCTAAGGCTGAAGGAAGAGCAGATAACATAA 1314 0.4817 MVGVANRDQPPSTSAAEGAAQPRPTITLPPHSSADTFFGGGAPPFAFSPGPMTLVSSLFATDGSGSNNNSDDYRSFSHLLAGAPVQSPLPMFPIYGLLDSPSAFFSSPQGQLGMTHQQTLEQVTAQAEVTSNSTHQIMLPSKPDSVGNSHSEQRLQPPPPPPPSSSYSSVNVDKPNDDGYNWRKYGQKQVKGSEFPRSYYKCTHPKCPVKKKVERSLEGHVTAIIYKGEHNHQCPHPDKITKDSTIANANSNMQGNCDSSVSKMDSGTSDNEEVDDHETEVDGEPDAKRRNTEFRNTDPTSSHRAVTEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPSCNVRKHVERASADPKAVITTYEGKHNHDVPAAKSNSHTLANNAASHQLKSQNVMLERHSFGSRGIEGNEPQQPVARLRLKEEQIT* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0387 437 MobiDBLite consensus disorder prediction 126 153 - -
Aev03g0387 437 MobiDBLite consensus disorder prediction 126 185 - -
Aev03g0387 437 MobiDBLite consensus disorder prediction 253 306 - -
Aev03g0387 437 MobiDBLite consensus disorder prediction 1 42 - -
Aev03g0387 437 MobiDBLite consensus disorder prediction 7 32 - -
Aev03g0387 437 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 18 436 IPR044810 GO:0003700
Aev03g0387 437 SUPERFAMILY WRKY DNA-binding domain 314 382 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev03g0387 437 MobiDBLite consensus disorder prediction 281 297 - -
Aev03g0387 437 Pfam WRKY DNA -binding domain 323 380 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev03g0387 437 Pfam WRKY DNA -binding domain 177 233 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev03g0387 437 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 18 436 - -
Aev03g0387 437 ProSiteProfiles WRKY domain profile. 317 382 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev03g0387 437 ProSiteProfiles WRKY domain profile. 176 235 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev03g0387 437 SUPERFAMILY WRKY DNA-binding domain 175 235 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev03g0387 437 MobiDBLite consensus disorder prediction 408 437 - -
Aev03g0387 437 SMART WRKY_cls 176 234 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev03g0387 437 SMART WRKY_cls 322 381 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev03g0387 437 MobiDBLite consensus disorder prediction 253 267 - -
Aev03g0387 437 Gene3D WRKY domain 307 383 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev03g0387 437 Gene3D WRKY domain 164 236 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0387 Aev-Chr3 2835333 2837435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0387 23 437 WRKY Transcription Factor Family AT2G03340 48.084 1.79e-134 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aev03g0387 WRKY 2.9e-25 CL0274