Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0355 ATGTTGGGTGGCCTCTATGGTGACCTTCCTCCACCCTCTTCGGCGGAGGAAGACAAACCCATCACCAACACCACCAACGTGTGGTCCACTAGCACCAAGATGGCTCCCGCCACCCTCCGCAAACCCGCCTCCGTCTTCGCCCCTCCACAAACCCTCCTTCGATCCCAAAACAAACCCAAACCTCCTACTTCTTCACTCCCCAAAACCCCCTCAATCCCCGCCGCTCCGCCGCTGCCGGTGCTACCCGACGACGCTCCACATCAACCAGCACTAGTCGGCGTCCAATCGACGGTTATTGAAGAGTACGACCCTGCCAGACCGAACGATTACGAGGAGTACCGCCGTGAACGGAAGCGGAAGGCGAGGGAGGCGGAGATGATGAGGGAGCTGGAGCGGCGGCGCCAGGAGGAGGAGGAGAGAGAGAGAAGAGAGAGGGAGGAGAGAGAAAGGGAGAAGGATTACGGCGGTGGCGGTGGTGGTGGTGATTCCAGGTTGAATATTTCCGGAGAGGAGGCGTGGAGGCGGCGCGCTGCAATGAGCGGAGGCAACAGTGGAGGGGGCGGTACGGTGCCGAGATCACCATCGCCGCCGGGGAACGCAGATGGGTTTACCATTGGGAAGTCGGAAACAGGAGGGTTGGGGCTCGGTGCCGGTGGGCAGATGACGGCGGCGCAGAGGATGATGGCGAAGATGGGGTGGAAGGAAGGGCAGGGTCTTGGGAAGCAGGAGCAAGGGATCACCACTCCATTGATGGCGAAGAAGACTGATAGAAGAGCTGGGGTTATTGTTAATGCCAGTGAGAATAGTAATAGTAAGTCGGAGAAGAAGGTGAAGAGTGTGAATTTCAATGGGGTGCCTACTAGGGTTCTTCTGCTTAGGAACATGGTGGGTCCTGGTGAGGTAGATGATGAACTTGAAGATGAGGTAGGATCAGAATGTGCCAAGTATGGGACAGTAACTCGGGTTCTGATCTTCGAGATAACAGAGCCAAATTTCCCCACAGATGAAGCAGTAAGAATATTTGTGCAGTTTGAGAGATCAGAAGAAACAACTAAAGCATTTGTCGACCTCGACGGTCGGTATTTTGGCGGTAGAGTGGTGCGCGCTTCATTTTATGACGAGGATAAGTTCAACAAGAATGAGTTAGCTCCAATGCCAGGAGAAATTCCTGGTTTCGCCTGA 1182 0.5516 MLGGLYGDLPPPSSAEEDKPITNTTNVWSTSTKMAPATLRKPASVFAPPQTLLRSQNKPKPPTSSLPKTPSIPAAPPLPVLPDDAPHQPALVGVQSTVIEEYDPARPNDYEEYRRERKRKAREAEMMRELERRRQEEEERERREREEREREKDYGGGGGGGDSRLNISGEEAWRRRAAMSGGNSGGGGTVPRSPSPPGNADGFTIGKSETGGLGLGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDRRAGVIVNASENSNSKSEKKVKSVNFNGVPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEITEPNFPTDEAVRIFVQFERSEETTKAFVDLDGRYFGGRVVRASFYDEDKFNKNELAPMPGEIPGFA* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0355 393 Pfam G-patch domain 223 262 IPR000467 GO:0003676
Aev03g0355 393 Gene3D - 284 382 IPR012677 -
Aev03g0355 393 MobiDBLite consensus disorder prediction 104 157 - -
Aev03g0355 393 MobiDBLite consensus disorder prediction 63 84 - -
Aev03g0355 393 PIRSF SPF45 3 389 IPR040052 GO:0045292
Aev03g0355 393 ProSiteProfiles G-patch domain profile. 220 266 IPR000467 GO:0003676
Aev03g0355 393 MobiDBLite consensus disorder prediction 1 215 - -
Aev03g0355 393 SMART G-patch_5 218 264 IPR000467 GO:0003676
Aev03g0355 393 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 288 374 IPR000504 GO:0003723
Aev03g0355 393 PANTHER SPLICING FACTOR 45 SPF45 1 384 IPR040052 GO:0045292
Aev03g0355 393 MobiDBLite consensus disorder prediction 17 37 - -
Aev03g0355 393 Coils Coil 110 153 - -
Aev03g0355 393 SMART rrm2_1 289 370 IPR003954 GO:0003676
Aev03g0355 393 CDD RRM_UHM_SPF45 286 382 IPR034653 -
Aev03g0355 393 SUPERFAMILY RNA-binding domain, RBD 290 377 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0355 Aev-Chr3 2652085 2654155 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0355 226 261 C2H2 Transcription Factor Family AT5G26610 61.111 1.22e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0355 K12840 - gmx:100800998 469.544