Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0354 ATGACTACTCCGGGGTCAAGCTCAAGAGTGAAATTCAATGAAAGTAGCTCAGAAGTTGAAGCAGAAAAGCAAGCCCCATCACAACCACGCACTGATCCTGCAACAAATTTGCCAGGAGATGATGAGATTAAACCACTTTCAGGAAATCCATACTTTGATTGGATTCTTCCAAAATCATCTCTTCATCATCAATGGCACATGGGTCCGCCAGTAAGCTTAAAACTTCCTTCTGCTCAGATCCCCACTGTTCTCAAGTGTGGAGGTAAGAGCTGGGACATGGTGTATAATGGAAGAGCCAAAGGTCGCAAGTTCTTTACCTGTCCAGGTTGGAGAAGGTTTGCTGAGGATAATGGTTTGAAGGTAGGAGACGGATGCGTTTTTGAACTCATGGAAAAAAGTGAAGAGAAACTCGTTTTCCAGGTTCAAATTCTTAGAGGTGAGATCCCCTCAATGCTTCTTGAAAAGGAAGAAACCATTGGTAGGAGCCAAGATGAGCCAATCATCATTGACTAG 513 0.4366 MTTPGSSSRVKFNESSSEVEAEKQAPSQPRTDPATNLPGDDEIKPLSGNPYFDWILPKSSLHHQWHMGPPVSLKLPSAQIPTVLKCGGKSWDMVYNGRAKGRKFFTCPGWRRFAEDNGLKVGDGCVFELMEKSEEKLVFQVQILRGEIPSMLLEKEETIGRSQDEPIIID* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0354 170 ProSiteProfiles B3 DNA-binding domain profile. 88 147 IPR003340 GO:0003677
Aev03g0354 170 Pfam B3 DNA binding domain 80 141 IPR003340 GO:0003677
Aev03g0354 170 Gene3D - 40 147 IPR015300 -
Aev03g0354 170 SUPERFAMILY DNA-binding pseudobarrel domain 48 145 IPR015300 -
Aev03g0354 170 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS04G0386900 15 158 - -
Aev03g0354 170 MobiDBLite consensus disorder prediction 1 44 - -
Aev03g0354 170 CDD B3_DNA 55 145 IPR003340 GO:0003677
Aev03g0354 170 SMART B3_2 52 147 IPR003340 GO:0003677
Aev03g0354 170 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 15 158 IPR044837 -
Aev03g0354 170 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0354 Aev-Chr3 2650566 2651510 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0354 82 147 REM Transcription Factor Family AT4G33280 34.783 1.50e-06 45.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Aev03g0354 B3 1.2e-13 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0354 - - adu:107474771 166.777