Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0283 ATGTATGTCTCCTTCTTATCCTTCTGTTTTCCCATCACTTTACCTTTTCTAAGCGGCCATTCGTTCTTCCTTCTAGCTTCTTCTTCTTGTTCTTCTATGGCGGTTTTACCAGGAAGCTCCTCCAGCTTGGAATTGACCATATCTGTCCCAGGCTTTGCACCAACGCTTCTTCCCTCTTCATCATCTGTAGTGAAAGAGTTGGACATAAACCAAGTACCGTCATCAGAAGAAGAATGGATTATGGCAACATCAAACATGGAAGACGAAGAAGAAAGCAGCAATGGAGAACCACCACGCAAGAAACTCCGTCTCACTAAGGAACAATCCCGTCTTCTCGAAGAGAGTTTCAGACAAAACCACACTTTAAACCCCAAGCAGAAAGAGACATTGGCAATGCAGCTGAAGCTACGACCAAGGCAAGTGGAGGTGTGGTTTCAGAACCGTAGGGCCAGGAGCAAGCTGAAGCAGACAGAGATGGAGTGCGAGTACTTAAAAAGGTGGTTCGGGTCATTGACAGAGCAGAACAGAAGGCTTCACAGAGAAGTGGAGGAGCTCAGGGCTATGAAGGTGGGGCCCCCCACCGTGTTATCCCCTCACTCCAGCGAGCCACTCCCTGCTTCCACCCTTACCATGTGTCCCCGCTGCGAGCGTGTCACCACCACCACCGCCGCCGCCCTGTCCCCTAAAGTGGCGACCGCAACTACTGCCGCTACCCTCTGA 720 0.5083 MYVSFLSFCFPITLPFLSGHSFFLLASSSCSSMAVLPGSSSSLELTISVPGFAPTLLPSSSSVVKELDINQVPSSEEEWIMATSNMEDEEESSNGEPPRKKLRLTKEQSRLLEESFRQNHTLNPKQKETLAMQLKLRPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLHREVEELRAMKVGPPTVLSPHSSEPLPASTLTMCPRCERVTTTTAAALSPKVATATTAATL* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0283 239 ProSiteProfiles 'Homeobox' domain profile. 95 155 IPR001356 GO:0003677
Aev03g0283 239 SMART halz 155 198 IPR003106 GO:0006355|GO:0043565
Aev03g0283 239 Coils Coil 168 188 - -
Aev03g0283 239 Gene3D - 91 161 - -
Aev03g0283 239 ProSitePatterns 'Homeobox' domain signature. 130 153 IPR017970 GO:0000981|GO:0006355
Aev03g0283 239 PANTHER - 33 234 - -
Aev03g0283 239 SUPERFAMILY Homeodomain-like 80 156 IPR009057 -
Aev03g0283 239 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-17 33 234 - -
Aev03g0283 239 CDD homeodomain 98 156 IPR001356 GO:0003677
Aev03g0283 239 Pfam Homeobox associated leucine zipper 155 189 IPR003106 GO:0006355|GO:0043565
Aev03g0283 239 Pfam Homeodomain 99 153 IPR001356 GO:0003677
Aev03g0283 239 SMART HOX_1 97 159 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0283 Aev-Chr3 2173418 2178039 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0283 64 219 Homeobox Transcription Factor Family AT1G70920 64.557 3.50e-63 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Aev03g0283 Homeodomain 4.5e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0283 K09338 - gmx:100775341 332.028