Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0279 ATGCCTTTAGACGAGATTAAATTGGAGGAAGGTGGACCAAGTAAGCCACCGCTTCCGTCAAGGAGTTCTGGTGGTGGGTTTTGCGGTTCCCCTGAGGTTGTTCAAATCATACAGAAGGTAATTGCAGAGGTGATAGGGACATACTTCTTAGTATTTCTAGGATGTTGCGTGGTGGTTTTGAATAAAGTGGAAGGAAGCAAAGGGACCATAACGTTTCCAGGGATATGTGTGACATGGGGTCTGGCCGTTATGATCTTGGTTTACGCTCTTGGTCACATCTCCGGTGGCCATTTCAATCCTGCTGTCACTGTTAGCTTCGCAATCTATCGTCATTTCCCTCCCAAACAGGTGCCTCTGTATCTCCTAGCTCAAATTTTAGGGTCTGTACTAGCTAGTGGGACATTGTACCTTCTATTTGATTTGGATGAGAATTCTTATTTTGGAACGGTACCAGCAGGACCTCATATTCAGTCTCTTGTATTTGAGATCCTCACGTCCTTTCTCTTGATGTTTGTTGTCTCCGCGGTTTCCACCGATAACAGAGCAATTGGAGAATTGGCAGGGATTGCTGTGGGTATGACAGTCTTAGTGGACGTTTTCGTTGCTGGGCCAGTGTCAGGGGCGTCGATGAACCCAGCAAGGAGCATAGGACCAGCAGTGGTGATGCAAGTGTACGATGGATTTTGGATATATATAGTGGGACCCTTTGCTGGAGCAATACTTGGTGCCTCAGCCTACAATCTAATCAGGTTCACTGATAAACCTCTCAGGGAAATCAGCCAGAGCTCTAGTTTCCTCAAAAGTGTCTCCAGAGCTAGTTTTGCCCTCTGA 831 0.4657 MPLDEIKLEEGGPSKPPLPSRSSGGGFCGSPEVVQIIQKVIAEVIGTYFLVFLGCCVVVLNKVEGSKGTITFPGICVTWGLAVMILVYALGHISGGHFNPAVTVSFAIYRHFPPKQVPLYLLAQILGSVLASGTLYLLFDLDENSYFGTVPAGPHIQSLVFEILTSFLLMFVVSAVSTDNRAIGELAGIAVGMTVLVDVFVAGPVSGASMNPARSIGPAVVMQVYDGFWIYIVGPFAGAILGASAYNLIRFTDKPLREISQSSSFLKSVSRASFAL* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0279 276 MobiDBLite consensus disorder prediction 1 24 - -
Aev03g0279 276 PANTHER AQUAPORIN NIP2-1 21 271 IPR034294 -
Aev03g0279 276 SUPERFAMILY Aquaporin-like 35 259 IPR023271 -
Aev03g0279 276 ProSitePatterns MIP family signature. 97 105 IPR022357 -
Aev03g0279 276 CDD MIP 38 249 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev03g0279 276 Gene3D Glycerol uptake facilitator protein. 28 263 IPR023271 -
Aev03g0279 276 Pfam Major intrinsic protein 34 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev03g0279 276 TIGRFAM MIP: MIP family channel proteins 42 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev03g0279 276 PRINTS Major intrinsic protein family signature 79 103 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev03g0279 276 PRINTS Major intrinsic protein family signature 116 135 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev03g0279 276 PRINTS Major intrinsic protein family signature 192 214 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev03g0279 276 PRINTS Major intrinsic protein family signature 229 249 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev03g0279 276 PRINTS Major intrinsic protein family signature 161 179 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev03g0279 276 PRINTS Major intrinsic protein family signature 38 57 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev03g0279 276 PANTHER AQUAPORIN NIP4-1 21 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0279 Aev-Chr3 2143258 2144615 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0279 4 270 Major Intrinsic Protein MIP AT5G37810 61.852 4.18e-114 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0279 K09874 - gmx:100819179 374.785