Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0270 ATGGCCGGCGAACTTGCCGGAGACCGCGCGCCGGAGCTCCTCCGCCTCGTCCACGACATCACCGGCATGTGCGCCGGAGCAATCGGGGGAGGTTCTTCTGCCAGTCCCGTCGCCGCCATTGCGGGCGACGGCACGTTCAGGAAGGACTGCACCGATCTGGTGCGCCGGATCTCGCTCCTCACGCACCTGTTCGAGGAGATTAAGGAGCTCAACAAGGTTGTCTGCTCCGCTTCGAGCTCATCTTCCGAAACTGATGCTCTTGGCGGTGCTTCTGAAACTGATGCTGATGCTGCTTCGTGGTCGTATGATGTGGTTATGGCTCTTCAGTCGGCGAAACGTTTGCTTTCTGTGGCCAGGAACTTCCGTTCCAATTGCTCTTCTGATGGAGCTGCCAAGACCATTGTCTTCCAATTTCAGAGCGTGACATGGAAATTGGAAAAACTATTAAGCAACTTACCATATGACAATTTAGACATTTCAGAGGAAGTCAGAGAACAGGTGGACTTGGTGAGGACACAATTAAGAAGAGCCAGTGAAAAATATGGGTATATGATTTCAAAAATGCCATCTTCTGAATTATCTGAGCCACTGGCTCAAGAAATCAGTCAGGTTCTTGGTAAATCCATGAGTGGATTGCATAAACGAAACAGCTGTCCTGAAAATTTATCAGAATTAGACAAAATGCCTAGAAACAATGGAGGACAAGGCTGCAGCACGATTCAGGCTGGTTCTCGCTTGGAAAGAACAAGGAGTATCCCTACCTTTTCTGAGATTTCTTTGACAACCTTAACTGATGCTGAAAGTCGAGAAAATTCTGAGAGTAAGAGCCTACCTGAAGTTAAAAGGCCCGAAGGAATTGTAATTCCTGAAGACTTCCTTTGCCCTATATCATTGGAACTAATGAGGGATCCTGTTATTGTGGCCACCGGTCAGACATATGAGAGATCCTATATACAGAGATGGATAGATTGTGGAAATACAACATGTCCAAAAACTCAGCAAAAACTGCAGCATTTGACCCTTACACCAAATTATGTTTTAAGGAGTCTTATTTCTCAGTGGTGTGTGGAGCACAACATTGAGCAGCCAACAGGACTAACTAATGGCAAATTAAAGAAAAGTGATGGATCATTCAGAGATGTCACAGGCGACATAGCAGTAATCGAAGCTCTTGTCCGGAAGCTCTCCAGCCGGTCTGTTGAGGAGCGTAGAGCAGCTGTTACTGAAATTCGATCACTATCCAAAAGAAGCACAGACAACAGGATCCTAATTGCTGAAGCTGGGGCAATTCCAGTTCTAGTCAACCTTTTGACTTCAGAAGATGTATTGACACAGGACAATGCAGTTACTTCAATCCTCAACCTCTCTATATATGAAAACAACAAAGGACTCATAATGCTTGCTGGTGCCATCCCATCCATTGTCCAGGTGCTCCGAGCAGGAACCATGGAAGCAAGAGAAAATGCAGCAGCTACCCTCTTTAGTTTGTCACTTGCCGATGAGAACAAAATAATAATAGGTGCCTCAGGAGCTATAACAGCATTGGTAGAATTGCTCGAAAATGGGAGCCCTAGGGGGAAGAAAGATGCAGCCACAGCATTGTTCAATTTATGTATTTATCAAGGGAACAAGGGAAGGGCCATTAGGGCGGGGATTATCACAGCATTGTTGAAGATGCTTACAGATTCAAGCAAGTCAATGGTCGACGAAGCCCTAACGATAATGTCGGTTCTTGCCAGCCACCAAGAGGCAAAGGTTGCTATAGTCAAGGCCAGCACCATACCAGTTTTGATAGATCTTTTGAGGACAGGATTACCTCGCAATAAAGAGAACGCGGCTGCCATTTTACTCGCCTTATGCAAGAGGGATGCTGAGAATCTTGCTTGCTTAAGTAGACTTGGTGCTGTCATACCTCTTTCGGAACTTGCTCGGAGTGGTACAGAGAGGGCCAAAAGAAAGGCTACTTCATTATTGGAGCATCTTCGTAAGTTACAGCAGCTTTGA 2004 0.4616 MAGELAGDRAPELLRLVHDITGMCAGAIGGGSSASPVAAIAGDGTFRKDCTDLVRRISLLTHLFEEIKELNKVVCSASSSSSETDALGGASETDADAASWSYDVVMALQSAKRLLSVARNFRSNCSSDGAAKTIVFQFQSVTWKLEKLLSNLPYDNLDISEEVREQVDLVRTQLRRASEKYGYMISKMPSSELSEPLAQEISQVLGKSMSGLHKRNSCPENLSELDKMPRNNGGQGCSTIQAGSRLERTRSIPTFSEISLTTLTDAESRENSESKSLPEVKRPEGIVIPEDFLCPISLELMRDPVIVATGQTYERSYIQRWIDCGNTTCPKTQQKLQHLTLTPNYVLRSLISQWCVEHNIEQPTGLTNGKLKKSDGSFRDVTGDIAVIEALVRKLSSRSVEERRAAVTEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVLTQDNAVTSILNLSIYENNKGLIMLAGAIPSIVQVLRAGTMEARENAAATLFSLSLADENKIIIGASGAITALVELLENGSPRGKKDAATALFNLCIYQGNKGRAIRAGIITALLKMLTDSSKSMVDEALTIMSVLASHQEAKVAIVKASTIPVLIDLLRTGLPRNKENAAAILLALCKRDAENLACLSRLGAVIPLSELARSGTERAKRKATSLLEHLRKLQQL* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0270 667 ProSiteProfiles U-box domain profile. 287 361 IPR003613 GO:0004842|GO:0016567
Aev03g0270 667 SUPERFAMILY ARM repeat 387 661 IPR016024 -
Aev03g0270 667 SUPERFAMILY RING/U-box 287 362 - -
Aev03g0270 667 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 287 361 IPR013083 -
Aev03g0270 667 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 428 470 IPR000225 GO:0005515
Aev03g0270 667 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 11 37 664 - -
Aev03g0270 667 SMART Ubox_2 291 354 IPR003613 GO:0004842|GO:0016567
Aev03g0270 667 Pfam U-box domain 288 359 IPR003613 GO:0004842|GO:0016567
Aev03g0270 667 SMART arm_5 499 539 IPR000225 GO:0005515
Aev03g0270 667 SMART arm_5 581 621 IPR000225 GO:0005515
Aev03g0270 667 SMART arm_5 458 498 IPR000225 GO:0005515
Aev03g0270 667 SMART arm_5 540 580 IPR000225 GO:0005515
Aev03g0270 667 SMART arm_5 417 457 IPR000225 GO:0005515
Aev03g0270 667 Coils Coil 160 180 - -
Aev03g0270 667 Gene3D - 584 662 IPR011989 -
Aev03g0270 667 Gene3D - 366 580 IPR011989 -
Aev03g0270 667 CDD RING-Ubox_PUB 292 334 IPR045210 -
Aev03g0270 667 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 469 511 IPR000225 GO:0005515
Aev03g0270 667 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 551 593 IPR000225 GO:0005515
Aev03g0270 667 Coils Coil 647 667 - -
Aev03g0270 667 PANTHER U BOX DOMAIN-CONTAINING 37 664 - -
Aev03g0270 667 Pfam Armadillo/beta-catenin-like repeat 500 538 IPR000225 GO:0005515
Aev03g0270 667 Pfam Armadillo/beta-catenin-like repeat 418 456 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0270 Aev-Chr3 2078230 2081735 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0270 44 666 U-box Gene Family AT1G23030 63.200 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0270 - - adu:107484242 1085.86