Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0255 ATGGCGCAGGCACTCGAACAAGTACAATGCTTTGGTCGTAAGAAAACCGCGGTGGCTGTCACCTACTGCAAGCGTGGCCGCGGCCTCATCAAGATCAACGGATGCCCCATCGAGCTGGTGGAGCCTGAGATTCTCCGCTTCAAGGCCTTCGAGCCAATCCTGCTCTTGGGGAAGAGCCGCTTCGCCGGCGTTGACATGAGAATCCGCGTGAAGGGTGGAGGACACACCTCGCAGATCTACGCCATTAGGCAGAGCATCGCGAAGGCTTTGGTTGCTTTCTACCAGAAGTACGTGGACGAGCAGAGCAAGAAGGAGATTAAGGATATCCTCGTCAGGTACGACCGTACCCTCCTTGTTGCCGATCCCAGGCGCTGCGAGCCAAAGAAGTTCGGTGGTCGTGGTGCTCGTGCCAGGTTCCAGAAGTCTTACCGCTGA 435 0.5701 MAQALEQVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGKSRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0255 144 Gene3D - 1 144 IPR014721 -
Aev03g0255 144 ProSitePatterns Ribosomal protein S9 signature. 72 90 IPR020574 GO:0003735|GO:0005840|GO:0006412
Aev03g0255 144 PANTHER - 3 144 - -
Aev03g0255 144 SUPERFAMILY Ribosomal protein S5 domain 2-like 7 144 IPR020568 -
Aev03g0255 144 PANTHER RIBOSOMAL PROTEIN S9 3 144 IPR000754 GO:0003735|GO:0005840|GO:0006412
Aev03g0255 144 Pfam Ribosomal protein S9/S16 12 144 IPR000754 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0255 Aev-Chr3 1963857 1964291 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0255 4 144 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 89.362 1.75e-92 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0255 K02960 - gmx:100812117 282.722
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0255 03 1963857 1964291 Aev03g0255 03 1963857 1964291 ECH