Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0252 ATGGGTATAGATGATCAAGGCCCAAATGACTACCACTTGAATTATCTGTGGGAAAATCAGCCGTCATGGGGTCTGTATGAGAACTCATTGTCGGATGATGAAAATGAAACCAACAACAAAAACAAGTTGTTGGACATCACCACCACCCCGCCGCCTCAGCGGAATAAAGGGGTTGTTATAATAGAGGAATTGTCTGAAGGAGGAGGAGGAGGAGGATCTAGTGTAAGAAACAACAACAAGAGAAGCAGAGGAGGAGGCACAGTAATAAGAAACAACAAGAAGGGGAAGAGGGTTGTGAATGGTGGTGGCCGTGAAGGAGCAGATCATGCACTTCACATATGGACTGAGAGAGAAAGGAGGAAGAAAATGAGGAACATGTTCGCTACTCTTCATTCTTTGCTTCCCCAACTTCCTTCTAAGGCGGACAAATCAAGCATCGTGGATGAAGCAGTGAGGTGCATAAAGAGTCTGGAGAAAACCGTTGAGAAGATGGAGAAGCTGAAAAGAGAGAAGGACGAAGCTGTGTGCCCAATTGGGTGCGAGTCATCTGTGACTGCCGTCAACTCACTCTGGGATCCCTATCTGGACCCAATCACCGATCAGGCCTCCTCCTCTTCAACTGCAGCACTCAAGACTTTTGTTTCCCCAAATTTGGTTCTCTCACTGTCGGGCAACAATCAAGCACAGTACAACATTTGTGTTTCTAAGAAGCCATGCCTCTTCACCACTATCGCTCTTGTGCTCCACAAGTACAACTTAGATGTCCTTTATGCCACCATGTTCTCCACTCCTACTACTAACAAATACCTCATCATCGCTCATGCAAACAAGGCCTTAGTGCAGTTCCAAGATGATGGTTCAGTGGAGCAAACTTTCAAGCGTGCGGCTGGAGAGATTTTAATGTGGCTCTCTTGA 915 0.4634 MGIDDQGPNDYHLNYLWENQPSWGLYENSLSDDENETNNKNKLLDITTTPPPQRNKGVVIIEELSEGGGGGGSSVRNNNKRSRGGGTVIRNNKKGKRVVNGGGREGADHALHIWTERERRKKMRNMFATLHSLLPQLPSKADKSSIVDEAVRCIKSLEKTVEKMEKLKREKDEAVCPIGCESSVTAVNSLWDPYLDPITDQASSSSTAALKTFVSPNLVLSLSGNNQAQYNICVSKKPCLFTTIALVLHKYNLDVLYATMFSTPTTNKYLIIAHANKALVQFQDDGSVEQTFKRAAGEILMWLS* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0252 304 Coils Coil 147 174 - -
Aev03g0252 304 Pfam Helix-loop-helix DNA-binding domain 113 158 IPR011598 GO:0046983
Aev03g0252 304 Gene3D - 104 173 IPR036638 GO:0046983
Aev03g0252 304 PANTHER - 15 303 IPR044278 GO:0003700|GO:0006355|GO:0009960
Aev03g0252 304 MobiDBLite consensus disorder prediction 28 104 - -
Aev03g0252 304 CDD bHLH_AtbHLH_like 112 165 IPR045239 -
Aev03g0252 304 SMART finulus 115 163 IPR011598 GO:0046983
Aev03g0252 304 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 106 170 IPR036638 GO:0046983
Aev03g0252 304 MobiDBLite consensus disorder prediction 71 86 - -
Aev03g0252 304 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 107 157 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0252 87 304 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 38.697 5.95e-39 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev03g0252 HLH 2.4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0252 - - adu:107469983 220.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0252 03 1943709 1946707 Aev03g0252 03 1943709 1946707 ECH